Difference between revisions of "SJ22267"

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(Created page with "Category:gene == Gene SJ01024 == * transcription-direction: ** negative * right-end-position: ** 239269 * left-end-position: ** 233634 * centisome-position: ** 42.04894...")
(Created page with "Category:gene == Gene SJ22267 == * transcription-direction: ** positive * right-end-position: ** 465966 * left-end-position: ** 452486 * centisome-position: ** 77.6564...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01024 ==
+
== Gene SJ22267 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 239269
+
** 465966
 
* left-end-position:
 
* left-end-position:
−
** 233634
+
** 452486
 
* centisome-position:
 
* centisome-position:
−
** 42.04894    
+
** 77.6564    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.1.1.34-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.11.1.15-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-11866]]
+
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-11868]]
+
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-2542]]
+
* [[RXN-15288]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-267]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5468]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6829]]
+
* [[PWY-7214]]
−
** '''11''' reactions found over '''15''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-1422]]
+
* [[PWY-7445]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5466]]
−
{{#set: right-end-position=239269}}
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
{{#set: left-end-position=233634}}
+
* [[PWY-6824]]
−
{{#set: centisome-position=42.04894   }}
+
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5469]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5461]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=465966}}
 +
{{#set: left-end-position=452486}}
 +
{{#set: centisome-position=77.6564   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:05, 18 March 2021

Gene SJ22267

  • transcription-direction:
    • positive
  • right-end-position:
    • 465966
  • left-end-position:
    • 452486
  • centisome-position:
    • 77.6564

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22267&oldid=134175"