Difference between revisions of "SJ22270"

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(Created page with "Category:gene == Gene SJ13518 == * transcription-direction: ** negative * right-end-position: ** 118248 * left-end-position: ** 102501 * centisome-position: ** 30.633984...")
 
(Created page with "Category:gene == Gene SJ22270 == * transcription-direction: ** positive * right-end-position: ** 505631 * left-end-position: ** 498074 * centisome-position: ** 85.48030...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13518 ==
+
== Gene SJ22270 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 118248
+
** 505631
 
* left-end-position:
 
* left-end-position:
−
** 102501
+
** 498074
 
* centisome-position:
 
* centisome-position:
−
** 30.633984    
+
** 85.48030    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[F16BDEPHOS-RXN]]
+
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-15288]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[SUGAR-PHOSPHATASE-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[P185-PWY]]
+
* [[PWY-7214]]
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY66-399]]
+
* [[PWY-7445]]
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[SUCSYN-PWY]]
+
* [[PWY-5466]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[CALVIN-PWY]]
+
* [[PWY-6824]]
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[GLUCONEO-PWY]]
+
* [[PWY-5469]]
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5484]]
+
* [[PWY-5461]]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[GLYCOLYSIS]]
+
{{#set: transcription-direction=positive}}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
{{#set: right-end-position=505631}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=498074}}
−
{{#set: right-end-position=118248}}
+
{{#set: centisome-position=85.48030   }}
−
{{#set: left-end-position=102501}}
 
−
{{#set: centisome-position=30.633984   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:05, 18 March 2021

Gene SJ22270

  • transcription-direction:
    • positive
  • right-end-position:
    • 505631
  • left-end-position:
    • 498074
  • centisome-position:
    • 85.48030

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22270&oldid=134059"