Difference between revisions of "SJ22289"

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(Created page with "Category:gene == Gene SJ18074 == * transcription-direction: ** negative * right-end-position: ** 232299 * left-end-position: ** 220067 * centisome-position: ** 87.03805...")
 
(Created page with "Category:gene == Gene SJ08182 == * transcription-direction: ** positive * right-end-position: ** 103486 * left-end-position: ** 89108 * centisome-position: ** 20.03602...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18074 ==
+
== Gene SJ08182 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 232299
+
** 103486
 
* left-end-position:
 
* left-end-position:
−
** 220067
+
** 89108
 
* centisome-position:
 
* centisome-position:
−
** 87.03805    
+
** 20.03602    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[3.1.1.64-RXN]]
+
* [[GLUTATHIONE-PEROXIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[3.1.1.75-RXN]]
+
* [[GSHTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
* [[GST-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10711]]
+
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10767]]
+
* [[RXN-13673]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12252]]
+
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12575]]
+
* [[RXN-15288]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXNQT-4366]]
+
* [[RXN-15680]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6303]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[DETOX1-PWY-1]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4081]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6842]]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4061]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY66-374]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7112]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7214]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-7445]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7533]]
−
{{#set: right-end-position=232299}}
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=220067}}
+
* [[PWY-5466]]
−
{{#set: centisome-position=87.03805   }}
+
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6824]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5469]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5461]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=103486}}
 +
{{#set: left-end-position=89108}}
 +
{{#set: centisome-position=20.03602   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=13}}

Revision as of 14:22, 26 August 2019

Gene SJ08182

  • transcription-direction:
    • positive
  • right-end-position:
    • 103486
  • left-end-position:
    • 89108
  • centisome-position:
    • 20.03602

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • DETOX1-PWY-1
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4081
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22289&oldid=19290"