Difference between revisions of "SJ22334"
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(Created page with "Category:gene == Gene SJ11429 == * transcription-direction: ** negative * right-end-position: ** 90509 * left-end-position: ** 84321 * centisome-position: ** 22.644655...") |
(Created page with "Category:gene == Gene SJ22334 == * transcription-direction: ** positive * right-end-position: ** 111189 * left-end-position: ** 93285 * centisome-position: ** 52.413486...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ22334 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 111189 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 93285 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 52.413486 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[AN2PT]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[NAD-KIN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | == Pathway(s) associated == |
| − | {{#set: centisome-position= | + | * [[NADPHOS-DEPHOS-PWY-1]] |
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-7269]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7268]] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[NADPHOS-DEPHOS-PWY]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-5083]] | ||
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=111189}} | ||
| + | {{#set: left-end-position=93285}} | ||
| + | {{#set: centisome-position=52.413486 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=5}} | ||
Latest revision as of 11:02, 18 March 2021
Contents
Gene SJ22334
- transcription-direction:
- positive
- right-end-position:
- 111189
- left-end-position:
- 93285
- centisome-position:
- 52.413486
Organism(s) associated with this gene
Reaction(s) associated
- AN2PT
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- NAD-KIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- NADPHOS-DEPHOS-PWY-1
- 2 reactions found over 2 reactions in the full pathway
- PWY-7269
- 5 reactions found over 5 reactions in the full pathway
- PWY-7268
- 4 reactions found over 5 reactions in the full pathway
- NADPHOS-DEPHOS-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-5083
- 5 reactions found over 6 reactions in the full pathway
