Difference between revisions of "SJ22411"

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(Created page with "Category:gene == Gene SJ12523 == * transcription-direction: ** negative * right-end-position: ** 317108 * left-end-position: ** 305453 * centisome-position: ** 85.384315...")
(Created page with "Category:gene == Gene SJ22411 == * transcription-direction: ** positive * right-end-position: ** 59109 * left-end-position: ** 45285 * centisome-position: ** 25.572464...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12523 ==
+
== Gene SJ22411 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 317108
+
** 59109
 
* left-end-position:
 
* left-end-position:
−
** 305453
+
** 45285
 
* centisome-position:
 
* centisome-position:
−
** 85.384315    
+
** 25.572464    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[FERRIC-CHELATE-REDUCTASE-RXN]]
−
* [[ADENPRIBOSYLTRAN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[APPRT]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GUANPRIBOSYLTRAN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[HPRT]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[HYPOXANPRIBOSYLTRAN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[XPPRT]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7807]]
+
* [[PWY-6854]]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6610]]
+
* [[PWY-5934]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7805]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=59109}}
−
* [[PWY-6605]]
+
{{#set: left-end-position=45285}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=25.572464   }}
−
* [[P121-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6599]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6620]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6609]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=317108}}
 
−
{{#set: left-end-position=305453}}
 
−
{{#set: centisome-position=85.384315   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=2}}

Revision as of 08:14, 15 March 2021

Gene SJ22411

  • transcription-direction:
    • positive
  • right-end-position:
    • 59109
  • left-end-position:
    • 45285
  • centisome-position:
    • 25.572464

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6854
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5934
    • 1 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22411&oldid=119090"