Difference between revisions of "SJ22436"
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(Created page with "Category:gene == Gene SJ05510 == * transcription-direction: ** positive * right-end-position: ** 435890 * left-end-position: ** 425828 * centisome-position: ** 86.1632...") |
(Created page with "Category:gene == Gene SJ03114 == * transcription-direction: ** negative * right-end-position: ** 12340 * left-end-position: ** 4918 * centisome-position: ** 3.9366045...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ03114 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 12340 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 4918 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 3.9366045 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GSHTRAN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GST-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-13673]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-15680]] |
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6842]] |
| − | ** ''' | + | ** '''5''' reactions found over '''9''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-4061]] |
| − | ** ''' | + | ** '''4''' reactions found over '''8''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7112]] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7533]] |
| − | ** ''' | + | ** '''3''' reactions found over '''9''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | {{#set: transcription-direction=negative}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=12340}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=4918}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=3.9366045 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
{{#set: nb pathway associated=4}} | {{#set: nb pathway associated=4}} | ||
Revision as of 08:14, 15 March 2021
Contents
Gene SJ03114
- transcription-direction:
- negative
- right-end-position:
- 12340
- left-end-position:
- 4918
- centisome-position:
- 3.9366045
Organism(s) associated with this gene
Reaction(s) associated
- GSHTRAN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- GST-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13673
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15680
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6842
- 5 reactions found over 9 reactions in the full pathway
- PWY-4061
- 4 reactions found over 8 reactions in the full pathway
- PWY-7112
- 3 reactions found over 4 reactions in the full pathway
- PWY-7533
- 3 reactions found over 9 reactions in the full pathway
