Difference between revisions of "SJ22552"
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(Created page with "Category:gene == Gene SJ18598 == * transcription-direction: ** positive * right-end-position: ** 579615 * left-end-position: ** 568733 * centisome-position: ** 88.03344...") |
(Created page with "Category:gene == Gene SJ19310 == * transcription-direction: ** negative * right-end-position: ** 190464 * left-end-position: ** 180889 * centisome-position: ** 79.16714...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19310 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 190464 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 180889 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 79.16714 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[PROTOHEMEFERROCHELAT-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * [[RXN-17518]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY0-1415]] | ||
| + | ** '''5''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[HEMESYN2-PWY]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[HEME-BIOSYNTHESIS-II]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-7766]] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=190464}} | ||
| + | {{#set: left-end-position=180889}} | ||
| + | {{#set: centisome-position=79.16714 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=4}} | ||
Revision as of 15:16, 5 January 2021
Contents
Gene SJ19310
- transcription-direction:
- negative
- right-end-position:
- 190464
- left-end-position:
- 180889
- centisome-position:
- 79.16714
Organism(s) associated with this gene
Reaction(s) associated
- PROTOHEMEFERROCHELAT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-17518
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY0-1415
- 5 reactions found over 4 reactions in the full pathway
- HEMESYN2-PWY
- 3 reactions found over 4 reactions in the full pathway
- HEME-BIOSYNTHESIS-II
- 4 reactions found over 4 reactions in the full pathway
- PWY-7766
- 3 reactions found over 5 reactions in the full pathway
