Difference between revisions of "SJ22618"

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(Created page with "Category:gene == Gene SJ03226 == * transcription-direction: ** positive * right-end-position: ** 188306 * left-end-position: ** 138541 * centisome-position: ** 26.23187...")
 
(Created page with "Category:gene == Gene SJ09403 == * transcription-direction: ** negative * right-end-position: ** 250836 * left-end-position: ** 240843 * centisome-position: ** 57.689297...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03226 ==
+
== Gene SJ09403 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 188306
+
** 250836
 
* left-end-position:
 
* left-end-position:
−
** 138541
+
** 240843
 
* centisome-position:
 
* centisome-position:
−
** 26.23187    
+
** 57.689297    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HOMOCYSMET-RXN]]
+
* [[PEROXID-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[HOMOCYSMETB12-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-14240]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5041]]
+
* [[PWY-7214]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[HSERMETANA-PWY]]
+
* [[PWY-7445]]
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[HOMOSER-METSYN-PWY]]
+
* [[PWY-5466]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6151]]
+
* [[PWY-6824]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-702]]
+
* [[PWY-5469]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-3841]]
+
* [[PWY-5461]]
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[1CMET2-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=250836}}
−
* [[ADENOSYLHOMOCYSCAT-PWY]]
+
{{#set: left-end-position=240843}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=57.689297   }}
−
* [[PWY-2201]]
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=188306}}
 
−
{{#set: left-end-position=138541}}
 
−
{{#set: centisome-position=26.23187   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=6}}

Revision as of 14:22, 26 August 2019

Gene SJ09403

  • transcription-direction:
    • negative
  • right-end-position:
    • 250836
  • left-end-position:
    • 240843
  • centisome-position:
    • 57.689297

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22618&oldid=19106"