Difference between revisions of "SJ22653"

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(Created page with "Category:gene == Gene SJ17355 == * transcription-direction: ** positive * right-end-position: ** 88502 * left-end-position: ** 80902 * centisome-position: ** 30.739944...")
(Created page with "Category:gene == Gene SJ21863 == * transcription-direction: ** positive * right-end-position: ** 102674 * left-end-position: ** 97880 * centisome-position: ** 52.936436...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17355 ==
+
== Gene SJ21863 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 88502
+
** 102674
 
* left-end-position:
 
* left-end-position:
−
** 80902
+
** 97880
 
* centisome-position:
 
* centisome-position:
−
** 30.739944    
+
** 52.936436    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ARACHIDONATE-15-LIPOXYGENASE-RXN]]
−
* [[GDR]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GDR_LPAREN_nadp_RPAREN_]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GDR_LPAREN_nadp_RPAREN_h]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GDR_LPAREN_nadp_RPAREN_m]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GDRh]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GDRm]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTATHIONE-REDUCT-NADPH-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-1321]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8497]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-4081]]
+
* [[PWY-5410]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[GLUT-REDOX-PWY]]
+
* [[PWY-735]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-6917]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5406]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5407]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5408]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=88502}}
+
{{#set: right-end-position=102674}}
−
{{#set: left-end-position=80902}}
+
{{#set: left-end-position=97880}}
−
{{#set: centisome-position=30.739944   }}
+
{{#set: centisome-position=52.936436   }}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=6}}

Revision as of 20:26, 18 December 2020

Gene SJ21863

  • transcription-direction:
    • positive
  • right-end-position:
    • 102674
  • left-end-position:
    • 97880
  • centisome-position:
    • 52.936436

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5410
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY-6917
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5406
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5407
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5408
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22653&oldid=43976"