Difference between revisions of "SJ22653"

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(Created page with "Category:gene == Gene SJ21863 == * transcription-direction: ** positive * right-end-position: ** 102674 * left-end-position: ** 97880 * centisome-position: ** 52.936436...")
(Created page with "Category:gene == Gene SJ18140 == * transcription-direction: ** negative * right-end-position: ** 18424 * left-end-position: ** 14453 * centisome-position: ** 5.739326...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21863 ==
+
== Gene SJ18140 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 102674
+
** 18424
 
* left-end-position:
 
* left-end-position:
−
** 97880
+
** 14453
 
* centisome-position:
 
* centisome-position:
−
** 52.936436    
+
** 5.739326    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ARACHIDONATE-15-LIPOXYGENASE-RXN]]
+
* [[CARBODEHYDRAT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-1321]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8497]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-5224]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5410]]
+
* [[PWY-6142]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''10''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-735]]
+
* [[PWYQT-4429]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6917]]
+
* [[CYANCAT-PWY]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5406]]
+
* [[PWY-5744]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-5407]]
+
* [[PWY-5789]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-5408]]
+
* [[PWY-5743]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''13''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-241]]
−
{{#set: right-end-position=102674}}
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
{{#set: left-end-position=97880}}
+
* [[PWY-7115]]
−
{{#set: centisome-position=52.936436   }}
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-7117]]
−
{{#set: nb reaction associated=3}}
+
** '''10''' reactions found over '''12''' reactions in the full pathway
−
{{#set: nb pathway associated=6}}
+
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=18424}}
 +
{{#set: left-end-position=14453}}
 +
{{#set: centisome-position=5.739326   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=9}}

Revision as of 14:50, 5 January 2021

Gene SJ18140

  • transcription-direction:
    • negative
  • right-end-position:
    • 18424
  • left-end-position:
    • 14453
  • centisome-position:
    • 5.739326

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-241
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7115
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22653&oldid=57002"