Difference between revisions of "SMO"

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(Created page with "Category:reaction == Reaction CYTOCHROME-C-PEROXIDASE-RXN == * direction: ** left-to-right * common-name: ** cytochrome-c peroxidase ** cytochrome c peroxidase * ec-number...")
(Created page with "Category:reaction == Reaction UDP-GLUCOSE-46-DEHYDRATASE-RXN == * direction: ** left-to-right * common-name: ** udp-glucose 4,6-dehydratase * ec-number: ** [http://enzyme....")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction CYTOCHROME-C-PEROXIDASE-RXN ==
+
== Reaction UDP-GLUCOSE-46-DEHYDRATASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** cytochrome-c peroxidase
+
** udp-glucose 4,6-dehydratase
** cytochrome c peroxidase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.11.1.5 ec-1.11.1.5]
+
** [http://enzyme.expasy.org/EC/4.2.1.76 ec-4.2.1.76]
 
== Reaction formula ==
 
== Reaction formula ==
* 2 [[Cytochromes-C-Reduced]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[Cytochromes-C-Oxidized]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[CPD-12575]][c] '''=>''' 1 [[CPD-663]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17253]]
+
* Gene: [[SJ16241]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ16420]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ04585]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ14435]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ01912]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08982]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-3261]], UDP-β-L-rhamnose biosynthesis:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21501 21501]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00017 R00017]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00293 R00293]
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P55929 P55929]
 
** [http://www.uniprot.org/uniprot/O66533 O66533]
 
** [http://www.uniprot.org/uniprot/Q9RYL1 Q9RYL1]
 
** [http://www.uniprot.org/uniprot/Q9KVQ2 Q9KVQ2]
 
** [http://www.uniprot.org/uniprot/Q9ZJF8 Q9ZJF8]
 
** [http://www.uniprot.org/uniprot/O25997 O25997]
 
** [http://www.uniprot.org/uniprot/Q9PIE3 Q9PIE3]
 
** [http://www.uniprot.org/uniprot/Q9PJ91 Q9PJ91]
 
** [http://www.uniprot.org/uniprot/Q8X5N0 Q8X5N0]
 
** [http://www.uniprot.org/uniprot/P14532 P14532]
 
** [http://www.uniprot.org/uniprot/P00431 P00431]
 
** [http://www.uniprot.org/uniprot/P37197 P37197]
 
** [http://www.uniprot.org/uniprot/Q51658 Q51658]
 
** [http://www.uniprot.org/uniprot/Q50233 Q50233]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=cytochrome c peroxidase|cytochrome-c peroxidase}}
+
{{#set: common-name=udp-glucose 4,6-dehydratase}}
{{#set: ec-number=ec-1.11.1.5}}
+
{{#set: ec-number=ec-4.2.1.76}}
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:06, 14 January 2021

Reaction UDP-GLUCOSE-46-DEHYDRATASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • udp-glucose 4,6-dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3261, UDP-β-L-rhamnose biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links