Difference between revisions of "SMO"

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(Created page with "Category:reaction == Reaction RXN-14116 == * direction: ** left-to-right * common-name: ** 1-pyrroline-5-carboxylate dehydrogenase * ec-number: ** [http://enzyme.expasy.or...")
(Created page with "Category:reaction == Reaction CYTOCHROME-C-PEROXIDASE-RXN == * direction: ** left-to-right * common-name: ** cytochrome-c peroxidase ** cytochrome c peroxidase * ec-number...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14116 ==
+
== Reaction CYTOCHROME-C-PEROXIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 1-pyrroline-5-carboxylate dehydrogenase
+
** cytochrome-c peroxidase
 +
** cytochrome c peroxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.88 ec-1.2.1.88]
+
** [http://enzyme.expasy.org/EC/1.11.1.5 ec-1.11.1.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
+
* 2 [[Cytochromes-C-Reduced]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[Cytochromes-C-Oxidized]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10107]]
+
* Gene: [[SJ17253]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16420]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04585]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14435]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ01912]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08982]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6853]], ethylene biosynthesis II (microbes):
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PROUT-PWY]], L-proline degradation:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00245 R00245]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00017 R00017]
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30236 30236]
+
** [http://www.uniprot.org/uniprot/P55929 P55929]
 +
** [http://www.uniprot.org/uniprot/O66533 O66533]
 +
** [http://www.uniprot.org/uniprot/Q9RYL1 Q9RYL1]
 +
** [http://www.uniprot.org/uniprot/Q9KVQ2 Q9KVQ2]
 +
** [http://www.uniprot.org/uniprot/Q9ZJF8 Q9ZJF8]
 +
** [http://www.uniprot.org/uniprot/O25997 O25997]
 +
** [http://www.uniprot.org/uniprot/Q9PIE3 Q9PIE3]
 +
** [http://www.uniprot.org/uniprot/Q9PJ91 Q9PJ91]
 +
** [http://www.uniprot.org/uniprot/Q8X5N0 Q8X5N0]
 +
** [http://www.uniprot.org/uniprot/P14532 P14532]
 +
** [http://www.uniprot.org/uniprot/P00431 P00431]
 +
** [http://www.uniprot.org/uniprot/P37197 P37197]
 +
** [http://www.uniprot.org/uniprot/Q51658 Q51658]
 +
** [http://www.uniprot.org/uniprot/Q50233 Q50233]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-pyrroline-5-carboxylate dehydrogenase}}
+
{{#set: common-name=cytochrome c peroxidase|cytochrome-c peroxidase}}
−
{{#set: ec-number=ec-1.2.1.88}}
+
{{#set: ec-number=ec-1.11.1.5}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:07, 5 January 2021

Reaction CYTOCHROME-C-PEROXIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • cytochrome-c peroxidase
    • cytochrome c peroxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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