Difference between revisions of "SMO"

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(Created page with "Category:reaction == Reaction CYTOCHROME-C-PEROXIDASE-RXN == * direction: ** left-to-right * common-name: ** cytochrome-c peroxidase ** cytochrome c peroxidase * ec-number...")
(Created page with "Category:reaction == Reaction HYDROXYPYRUVATE-REDUCTASE-RXN == * direction: ** reversible * common-name: ** hydroxypyruvate reductase * ec-number: ** [http://enzyme.expasy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CYTOCHROME-C-PEROXIDASE-RXN ==
+
== Reaction HYDROXYPYRUVATE-REDUCTASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** cytochrome-c peroxidase
+
** hydroxypyruvate reductase
−
** cytochrome c peroxidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.11.1.5 ec-1.11.1.5]
+
** [http://enzyme.expasy.org/EC/1.1.1.81 ec-1.1.1.81]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[Cytochromes-C-Reduced]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[Cytochromes-C-Oxidized]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[GLYCERATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''<=>''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[OH-PYR]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17253]]
+
* Gene: [[SJ13526]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ16420]]
+
* Gene: [[SJ13642]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ04585]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ14435]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ01912]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ08982]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-1622]], formaldehyde assimilation I (serine pathway):
 +
** '''6''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00017 R00017]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01388 R01388]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17908 17908]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P55929 P55929]
+
** [http://www.uniprot.org/uniprot/Q59463 Q59463]
−
** [http://www.uniprot.org/uniprot/O66533 O66533]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9RYL1 Q9RYL1]
+
{{#set: common-name=hydroxypyruvate reductase}}
−
** [http://www.uniprot.org/uniprot/Q9KVQ2 Q9KVQ2]
+
{{#set: ec-number=ec-1.1.1.81}}
−
** [http://www.uniprot.org/uniprot/Q9ZJF8 Q9ZJF8]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/O25997 O25997]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9PIE3 Q9PIE3]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ91 Q9PJ91]
 
−
** [http://www.uniprot.org/uniprot/Q8X5N0 Q8X5N0]
 
−
** [http://www.uniprot.org/uniprot/P14532 P14532]
 
−
** [http://www.uniprot.org/uniprot/P00431 P00431]
 
−
** [http://www.uniprot.org/uniprot/P37197 P37197]
 
−
** [http://www.uniprot.org/uniprot/Q51658 Q51658]
 
−
** [http://www.uniprot.org/uniprot/Q50233 Q50233]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=cytochrome c peroxidase|cytochrome-c peroxidase}}
 
−
{{#set: ec-number=ec-1.11.1.5}}
 
−
{{#set: nb gene associated=6}}
 
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:37, 5 January 2021

Reaction HYDROXYPYRUVATE-REDUCTASE-RXN

  • direction:
    • reversible
  • common-name:
    • hydroxypyruvate reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-1622, formaldehyde assimilation I (serine pathway):
    • 6 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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