Difference between revisions of "SPERMIDINE"

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(Created page with "Category:gene == Gene SJ09429 == * transcription-direction: ** positive * right-end-position: ** 33557 * left-end-position: ** 14777 * centisome-position: ** 35.78139...")
(Created page with "Category:metabolite == Metabolite SPERMIDINE == * common-name: ** spermidine * smiles: ** c([n+])cc[n+]cccc[n+] * inchi-key: ** athghqpfgpmsjy-uhfffaoysa-q * molecular-wei...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ09429 ==
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== Metabolite SPERMIDINE ==
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* transcription-direction:
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* common-name:
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** positive
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** spermidine
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* right-end-position:
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* smiles:
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** 33557
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** c([n+])cc[n+]cccc[n+]
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* left-end-position:
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* inchi-key:
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** 14777
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** athghqpfgpmsjy-uhfffaoysa-q
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* centisome-position:
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* molecular-weight:
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** 35.78139   
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** 148.271
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[2.5.1.46-RXN]]
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== Reaction(s) associated ==
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* [[ABC-24-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-11190]]
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* [[ATPASE-RXN]]
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* [[RXN-13414]]
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** Category: [[annotation]]
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* [[SPERMIDINESYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[SPERMINE-SYNTHASE-RXN]]
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** Category: [[orthology]]
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* [[SPMDtmi]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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== Reaction(s) known to produce the compound ==
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[ABC-24-RXN]]
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* [[ATPSYN-RXN]]
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* [[APAPT]]
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** Category: [[annotation]]
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* [[RXN-11190]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[SPERMIDINESYN-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[SPMDtmi]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=spermidine}}
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* [[RXN-12195]]
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{{#set: inchi-key=inchikey=athghqpfgpmsjy-uhfffaoysa-q}}
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** Category: [[annotation]]
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{{#set: molecular-weight=148.271}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-7219]]
 
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** '''4''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=33557}}
 
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{{#set: left-end-position=14777}}
 
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{{#set: centisome-position=35.78139    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=6}}
 
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{{#set: nb pathway associated=5}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite SPERMIDINE

  • common-name:
    • spermidine
  • smiles:
    • c([n+])cc[n+]cccc[n+]
  • inchi-key:
    • athghqpfgpmsjy-uhfffaoysa-q
  • molecular-weight:
    • 148.271

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SPERMIDINE&oldid=138304"