Difference between revisions of "SPHINGANINE-KINASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-14517 == * direction: ** left-to-right * common-name: ** trna (guanine37-n1)-methyltransferase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction BETAGALACTOSID-RXN == * direction: ** left-to-right * common-name: ** β-galactosidase ** beta-galactosidase ** lactose galactohydrolase...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14517 ==
+
== Reaction BETAGALACTOSID-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** trna (guanine37-n1)-methyltransferase
+
** β-galactosidase
 +
** beta-galactosidase
 +
** lactose galactohydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.228 ec-2.1.1.228]
+
** [http://enzyme.expasy.org/EC/3.2.1.108 ec-3.2.1.108]
 +
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Guanine37-in-tRNAPhe]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNAPhe-Containing-N1-Methylguanine-37]][c]
+
* 1 [[CPD-15972]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GALACTOSE]][c] '''+''' 1 [[Glucopyranose]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00719]]
+
* Gene: [[SJ14193]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10277]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04558]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03139]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6829]], tRNA methylation (yeast):
+
* [[BGALACT-PWY]], lactose degradation III:
−
** '''11''' reactions found over '''15''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7286]], 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7285]], methylwyosine biosynthesis:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115736
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q29522 Q29522]
 +
** [http://www.uniprot.org/uniprot/Q29521 Q29521]
 +
** [http://www.uniprot.org/uniprot/Q29519 Q29519]
 +
** [http://www.uniprot.org/uniprot/Q29518 Q29518]
 +
** [http://www.uniprot.org/uniprot/P09849 P09849]
 +
** [http://www.uniprot.org/uniprot/P09848 P09848]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01100 R01100]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10076 10076]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=trna (guanine37-n1)-methyltransferase}}
+
{{#set: common-name=lactose galactohydrolase|beta-galactosidase|β-galactosidase}}
−
{{#set: ec-number=ec-2.1.1.228}}
+
{{#set: ec-number=ec-3.2.1.108|ec-3.2.1.23}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:39, 15 March 2021

Reaction BETAGALACTOSID-RXN

  • direction:
    • left-to-right
  • common-name:
    • β-galactosidase
    • beta-galactosidase
    • lactose galactohydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • BGALACT-PWY, lactose degradation III:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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