Difference between revisions of "SPHINGANINE-KINASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction BETAGALACTOSID-RXN == * direction: ** left-to-right * common-name: ** β-galactosidase ** beta-galactosidase ** lactose galactohydrolase...")
(Created page with "Category:reaction == Reaction SPHINGANINE-KINASE-RXN == * direction: ** left-to-right * common-name: ** sphinganine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BETAGALACTOSID-RXN ==
+
== Reaction SPHINGANINE-KINASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** β-galactosidase
+
** sphinganine kinase
−
** beta-galactosidase
 
−
** lactose galactohydrolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.108 ec-3.2.1.108]
+
** [http://enzyme.expasy.org/EC/2.7.1.91 ec-2.7.1.91]
−
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15972]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GALACTOSE]][c] '''+''' 1 [[Glucopyranose]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-13612]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-649]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14193]]
+
* Gene: [[SJ16261]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10277]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04558]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03139]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[BGALACT-PWY]], lactose degradation III:
+
* [[PWY-7119]], ceramide and sphingolipid recycling and degradation (yeast):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-5129]], sphingolipid biosynthesis (plants):
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115736
+
* METANETX-RXN : MNXR104439
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/Q29522 Q29522]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15466 15466]
−
** [http://www.uniprot.org/uniprot/Q29521 Q29521]
 
−
** [http://www.uniprot.org/uniprot/Q29519 Q29519]
 
−
** [http://www.uniprot.org/uniprot/Q29518 Q29518]
 
−
** [http://www.uniprot.org/uniprot/P09849 P09849]
 
−
** [http://www.uniprot.org/uniprot/P09848 P09848]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01100 R01100]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02976 R02976]
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10076 10076]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=lactose galactohydrolase|beta-galactosidase|β-galactosidase}}
+
{{#set: common-name=sphinganine kinase}}
−
{{#set: ec-number=ec-3.2.1.108|ec-3.2.1.23}}
+
{{#set: ec-number=ec-2.7.1.91}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction SPHINGANINE-KINASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • sphinganine kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7119, ceramide and sphingolipid recycling and degradation (yeast):
    • 4 reactions found over 16 reactions in the full pathway
  • PWY-5129, sphingolipid biosynthesis (plants):
    • 4 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR104439
  • RHEA:
  • LIGAND-RXN:





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SPHINGANINE-KINASE-RXN&oldid=142708"