Difference between revisions of "SPMDtmi"

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(Created page with "Category:reaction == Reaction KETOLACTOSE-RXN == * direction: ** left-to-right * common-name: ** beta-galactosidase ** 3-ketolactose hydrolase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction SPMDtmi == * direction: ** left-to-right * common-name: ** spermidine:proton symporter (irreversible), mitochondria == Reaction formula == *...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction KETOLACTOSE-RXN ==
+
== Reaction SPMDtmi ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** beta-galactosidase
+
** spermidine:proton symporter (irreversible), mitochondria
−
** 3-ketolactose hydrolase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-KETOLACTOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1242]][c] '''+''' 1 [[Glucopyranose]][c]
+
* 1.0 [[PROTON]][c] '''+''' 1.0 [[SPERMIDINE]][c] '''=>''' 1.0 [[PROTON]][m] '''+''' 1.0 [[SPERMIDINE]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14193]]
+
* Gene: [[SJ17432]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04558]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10277]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ03139]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LACTOSEUTIL-PWY]], lactose degradation II:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* METANETX-RXN : MNXR105374
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33788 33788]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04783 R04783]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P06219 P06219]
 
−
** [http://www.uniprot.org/uniprot/P11175 P11175]
 
−
** [http://www.uniprot.org/uniprot/P19668 P19668]
 
−
** [http://www.uniprot.org/uniprot/P20043 P20043]
 
−
** [http://www.uniprot.org/uniprot/P16278 P16278]
 
−
** [http://www.uniprot.org/uniprot/P23780 P23780]
 
−
** [http://www.uniprot.org/uniprot/P24131 P24131]
 
−
** [http://www.uniprot.org/uniprot/Q02603 Q02603]
 
−
** [http://www.uniprot.org/uniprot/Q53790 Q53790]
 
−
** [http://www.uniprot.org/uniprot/P23989 P23989]
 
−
** [http://www.uniprot.org/uniprot/P48982 P48982]
 
−
** [http://www.uniprot.org/uniprot/Q9UYG5 Q9UYG5]
 
−
** [http://www.uniprot.org/uniprot/Q02604 Q02604]
 
−
** [http://www.uniprot.org/uniprot/P0AC73 P0AC73]
 
−
** [http://www.uniprot.org/uniprot/O58247 O58247]
 
−
** [http://www.uniprot.org/uniprot/Q9UYH2 Q9UYH2]
 
−
** [http://www.uniprot.org/uniprot/P00722 P00722]
 
−
** [http://www.uniprot.org/uniprot/P06864 P06864]
 
−
** [http://www.uniprot.org/uniprot/Q47170 Q47170]
 
−
** [http://www.uniprot.org/uniprot/Q59140 Q59140]
 
−
** [http://www.uniprot.org/uniprot/P00723 P00723]
 
−
** [http://www.uniprot.org/uniprot/P94248 P94248]
 
−
** [http://www.uniprot.org/uniprot/O31341 O31341]
 
−
** [http://www.uniprot.org/uniprot/P22498 P22498]
 
−
** [http://www.uniprot.org/uniprot/Q02401 Q02401]
 
−
** [http://www.uniprot.org/uniprot/P26257 P26257]
 
−
** [http://www.uniprot.org/uniprot/Q59422 Q59422]
 
−
** [http://www.uniprot.org/uniprot/P30812 P30812]
 
−
** [http://www.uniprot.org/uniprot/Q12660 Q12660]
 
−
** [http://www.uniprot.org/uniprot/P45582 P45582]
 
−
** [http://www.uniprot.org/uniprot/P49676 P49676]
 
−
** [http://www.uniprot.org/uniprot/Q9SCV3 Q9SCV3]
 
−
** [http://www.uniprot.org/uniprot/Q9SZI5 Q9SZI5]
 
−
** [http://www.uniprot.org/uniprot/O81100 O81100]
 
−
** [http://www.uniprot.org/uniprot/Q42150 Q42150]
 
−
** [http://www.uniprot.org/uniprot/P48980 P48980]
 
−
** [http://www.uniprot.org/uniprot/P48981 P48981]
 
−
** [http://www.uniprot.org/uniprot/O86616 O86616]
 
−
** [http://www.uniprot.org/uniprot/P70753 P70753]
 
−
** [http://www.uniprot.org/uniprot/P29853 P29853]
 
−
** [http://www.uniprot.org/uniprot/P94804 P94804]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=beta-galactosidase|3-ketolactose hydrolase}}
+
{{#set: common-name=spermidine:proton symporter (irreversible), mitochondria}}
−
{{#set: ec-number=ec-3.2.1.23}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:18, 18 March 2021

Reaction SPMDtmi

  • direction:
    • left-to-right
  • common-name:
    • spermidine:proton symporter (irreversible), mitochondria

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SPMDtmi&oldid=140146"