Difference between revisions of "SPMDtmi"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-28 RXN66-28] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:reaction == Reaction HISTIDINE-AMMONIA-LYASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1.3 ec-4.3.1.3] == Reaction for...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-28 RXN66-28] ==
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== Reaction HISTIDINE-AMMONIA-LYASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.72 ec-1.3.1.72]
+
** [http://enzyme.expasy.org/EC/4.3.1.3 ec-4.3.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DESMOSTEROL-CPD]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHOLESTEROL]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[HIS]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[UROCANATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ07221]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
+
* [[HISDEG-PWY]], L-histidine degradation I:
−
** '''14''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5028]], L-histidine degradation II:
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5030]], L-histidine degradation III:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[HISHP-PWY]], L-histidine degradation VI:
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21233 21233]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01457 R01457]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01168 R01168]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21310 P21310]
 +
** [http://www.uniprot.org/uniprot/P21213 P21213]
 +
** [http://www.uniprot.org/uniprot/P35492 P35492]
 +
** [http://www.uniprot.org/uniprot/Q9RZ06 Q9RZ06]
 +
** [http://www.uniprot.org/uniprot/P24221 P24221]
 +
** [http://www.uniprot.org/uniprot/P42357 P42357]
 +
** [http://www.uniprot.org/uniprot/Q20502 Q20502]
 +
** [http://www.uniprot.org/uniprot/P10944 P10944]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.3.1.72}}
+
{{#set: ec-number=ec-4.3.1.3}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:39, 18 December 2020

Reaction HISTIDINE-AMMONIA-LYASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISDEG-PWY, L-histidine degradation I:
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5028, L-histidine degradation II:
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5030, L-histidine degradation III:
    • 3 reactions found over 6 reactions in the full pathway
  • HISHP-PWY, L-histidine degradation VI:
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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