Difference between revisions of "SQUALENE-MONOOXYGENASE-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-3...")
(Created page with "Category:reaction == Reaction SQUALENE-MONOOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing) * ec-num...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857] ==
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== Reaction SQUALENE-MONOOXYGENASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
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** left-to-right
 
* common-name:
 
* common-name:
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** retinol biosynthesis
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** squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing)
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-10841]]
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** [http://enzyme.expasy.org/EC/1.14.14.17 ec-1.14.14.17]
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* [[RXN-12575]]
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== Reaction formula ==
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* [[RXN-12579]]
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* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[SQUALENE]][c] '''=>''' 1 [[EPOXYSQUALENE]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[WATER]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12549 RXN-12549]
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* Gene: [[SJ00579]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.135-RXN 2.3.1.135-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12548 RXN-12548]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13374 RXN-13374]
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** Category: [[orthology]]
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{{#set: taxonomic-range=tax-33208}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=retinol biosynthesis}}
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== Pathway(s) ==
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{{#set: nb reaction found=3}}
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* [[PWY-6098]], diploterol biosynthesis:
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{{#set: completion rate=0.43}}
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** '''2''' reactions found over '''2''' reactions in the full pathway
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{{#set: nb total reaction=7}}
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* [[PWY-5670]], epoxysqualene biosynthesis:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR123887
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21941 21941]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02874 R02874]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P52020 P52020]
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** [http://www.uniprot.org/uniprot/P32476 P32476]
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** [http://www.uniprot.org/uniprot/Q9T064 Q9T064]
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** [http://www.uniprot.org/uniprot/O65829 O65829]
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** [http://www.uniprot.org/uniprot/O65726 O65726]
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** [http://www.uniprot.org/uniprot/O65727 O65727]
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** [http://www.uniprot.org/uniprot/O65402 O65402]
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** [http://www.uniprot.org/uniprot/O65403 O65403]
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** [http://www.uniprot.org/uniprot/O65404 O65404]
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{{#set: direction=left-to-right}}
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{{#set: common-name=squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing)}}
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{{#set: ec-number=ec-1.14.14.17}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction SQUALENE-MONOOXYGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • squalene,nadph:oxygen oxidoreductase (2,3-epoxidizing)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6098, diploterol biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5670, epoxysqualene biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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