Difference between revisions of "SS-Oligoribonucleotides"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] == * direction: ** left-to...")
(Created page with "Category:metabolite == Metabolite CPD-596 == * common-name: ** n6,n6-dimethyl-l-arginine * smiles: ** cn(c(=[n+])ncccc([n+])c(=o)[o-])c * inchi-key: ** ydgmgexadbmomj-lurj...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] ==
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== Metabolite CPD-596 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** 3',5'-cyclic-gmp phosphodiesterase
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** n6,n6-dimethyl-l-arginine
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/3.1.4.35 ec-3.1.4.35]
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** cn(c(=[n+])ncccc([n+])c(=o)[o-])c
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== Reaction formula ==
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* inchi-key:
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* 1 [[CGMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c]
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** ydgmgexadbmomj-lurjtmiesa-o
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ18680]]
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** 203.264
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[DIMETHYLARGININASE-RXN]]
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* Gene: [[SJ14526]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: common-name=n6,n6-dimethyl-l-arginine}}
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* Gene: [[SJ09726]]
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{{#set: inchi-key=inchikey=ydgmgexadbmomj-lurjtmiesa-o}}
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** Category: [[annotation]]
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{{#set: molecular-weight=203.264}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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== Pathway(s) ==
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16958 16958]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01234 R01234]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P04972 P04972]
 
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** [http://www.uniprot.org/uniprot/P16586 P16586]
 
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** [http://www.uniprot.org/uniprot/P23439 P23439]
 
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** [http://www.uniprot.org/uniprot/P35913 P35913]
 
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** [http://www.uniprot.org/uniprot/P33726 P33726]
 
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** [http://www.uniprot.org/uniprot/P09174 P09174]
 
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** [http://www.uniprot.org/uniprot/P52731 P52731]
 
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** [http://www.uniprot.org/uniprot/P51160 P51160]
 
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** [http://www.uniprot.org/uniprot/P18545 P18545]
 
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** [http://www.uniprot.org/uniprot/O76074 O76074]
 
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** [http://www.uniprot.org/uniprot/P11541 P11541]
 
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** [http://www.uniprot.org/uniprot/P27664 P27664]
 
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** [http://www.uniprot.org/uniprot/Q62037 Q62037]
 
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** [http://www.uniprot.org/uniprot/P23440 P23440]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=3',5'-cyclic-gmp phosphodiesterase}}
 
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{{#set: ec-number=ec-3.1.4.35}}
 
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{{#set: nb gene associated=3}}
 
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{{#set: nb pathway associated=0}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 20:36, 18 December 2020

Metabolite CPD-596

  • common-name:
    • n6,n6-dimethyl-l-arginine
  • smiles:
    • cn(c(=[n+])ncccc([n+])c(=o)[o-])c
  • inchi-key:
    • ydgmgexadbmomj-lurjtmiesa-o
  • molecular-weight:
    • 203.264

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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