Difference between revisions of "STRICTOSIDINE-SYNTHASE-RXN"
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(Created page with "Category:reaction == Reaction ACCAT == * direction: ** left-to-right * common-name: ** acetyl-coa c-acyltransferase == Reaction formula == * 1.0 2-METHYL-ACETO-ACETYL-CO...") |
(Created page with "Category:reaction == Reaction STRICTOSIDINE-SYNTHASE-RXN == * direction: ** left-to-right * common-name: ** strictosidine synthase * ec-number: ** [http://enzyme.expasy.or...") |
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(6 intermediate revisions by one other user not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction STRICTOSIDINE-SYNTHASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** strictosidine synthase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/4.3.3.2 ec-4.3.3.2] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[SECOLOGANIN-CPD]][c] '''+''' 1 [[TRYPTAMINE]][c] '''=>''' 1 [[STRICTOSIDINE]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ12255]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-5290]], secologanin and strictosidine biosynthesis: | ||
+ | ** '''2''' reactions found over '''17''' reactions in the full pathway | ||
+ | * [[PWY-6326]], camptothecin biosynthesis: | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR108386 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15013 15013] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03738 R03738] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9VAQ9 Q9VAQ9] | ||
+ | ** [http://www.uniprot.org/uniprot/P68175 P68175] | ||
+ | ** [http://www.uniprot.org/uniprot/P18417 P18417] | ||
+ | ** [http://www.uniprot.org/uniprot/P68174 P68174] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=strictosidine synthase}} |
+ | {{#set: ec-number=ec-4.3.3.2}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:23, 18 March 2021
Contents
Reaction STRICTOSIDINE-SYNTHASE-RXN
- direction:
- left-to-right
- common-name:
- strictosidine synthase
- ec-number:
Reaction formula
- 1 SECOLOGANIN-CPD[c] + 1 TRYPTAMINE[c] => 1 STRICTOSIDINE[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ12255
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5290, secologanin and strictosidine biosynthesis:
- 2 reactions found over 17 reactions in the full pathway
- PWY-6326, camptothecin biosynthesis:
- 2 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links