Difference between revisions of "SUC"

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(Created page with "Category:gene == Gene SJ16187 == * transcription-direction: ** negative * right-end-position: ** 48250 * left-end-position: ** 37134 * centisome-position: ** 12.974344...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** left-to-right * common-name: **...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ16187 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
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* transcription-direction:
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* direction:
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** negative
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** left-to-right
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* right-end-position:
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* common-name:
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** 48250
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** pyrroline-5-carboxylate reductase
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* left-end-position:
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* ec-number:
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** 37134
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** [http://enzyme.expasy.org/EC/1.5.1.2 ec-1.5.1.2]
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* centisome-position:
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== Reaction formula ==
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** 12.974344   
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* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PRO]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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* Gene: [[SJ22264]]
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== Reaction(s) associated ==
 
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* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* Gene: [[SJ15062]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-12195]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ11815]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-12196]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[RXN0-5462]]
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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** Category: [[annotation]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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== Pathway(s) associated ==
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7210]]
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7198]]
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7184]]
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6545]]
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== Reconstruction information  ==
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: transcription-direction=negative}}
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: right-end-position=48250}}
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== External links  ==
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{{#set: left-end-position=37134}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: centisome-position=12.974344    }}
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* RHEA:
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14107 14107]
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{{#set: nb reaction associated=5}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
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** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P32322 P32322]
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** [http://www.uniprot.org/uniprot/P27771 P27771]
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** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
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** [http://www.uniprot.org/uniprot/P14383 P14383]
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** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
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** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
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** [http://www.uniprot.org/uniprot/Q12740 Q12740]
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** [http://www.uniprot.org/uniprot/P22008 P22008]
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** [http://www.uniprot.org/uniprot/P54904 P54904]
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** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
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** [http://www.uniprot.org/uniprot/P17817 P17817]
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** [http://www.uniprot.org/uniprot/P32263 P32263]
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** [http://www.uniprot.org/uniprot/Q12641 Q12641]
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** [http://www.uniprot.org/uniprot/P46725 P46725]
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** [http://www.uniprot.org/uniprot/P74572 P74572]
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** [http://www.uniprot.org/uniprot/Q04708 Q04708]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=pyrroline-5-carboxylate reductase}}
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{{#set: ec-number=ec-1.5.1.2}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=5}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:24, 26 August 2019

Reaction PYRROLINECARBREDUCT-RXN

  • direction:
    • left-to-right
  • common-name:
    • pyrroline-5-carboxylate reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3341, L-proline biosynthesis III: PWY-3341
    • 4 reactions found over 5 reactions in the full pathway
  • PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 3 reactions found over 6 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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