Difference between revisions of "SUC-COA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17874 RXN-17874] == * direction: ** left-to-right * common-name: ** methionine aminopeptidase *...")
 
(Created page with "Category:metabolite == Metabolite SUC-COA == * common-name: ** succinyl-coa * smiles: ** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)ccc(=o)[o-])cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-]...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17874 RXN-17874] ==
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== Metabolite SUC-COA ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** methionine aminopeptidase
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** succinyl-coa
* ec-number:
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* smiles:
** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
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** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)ccc(=o)[o-])cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
== Reaction formula ==
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* inchi-key:
* 1 [[L-methionyl-L-cysteinyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-L-cysteine]][c]
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** vnoyujkhfwywir-itiydsspsa-i
== Gene(s) associated with this reaction  ==
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* molecular-weight:
* Gene: [[SJ16932]]
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** 862.568
** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[AKGDHe2r]]
* Gene: [[SJ01604]]
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* [[HOMSUCTRAN-RXN]]
** Category: [[annotation]]
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* [[RXN0-1147]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[SUCCCOASYN-RXN]]
* Gene: [[SJ18138]]
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
** Category: [[annotation]]
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* [[SUCL_LPAREN_gdp_RPAREN_m]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) known to produce the compound ==
* Gene: [[SJ16573]]
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* [[2OXOGLUTARATEDEH-RXN]]
** Category: [[annotation]]
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* [[AKGDHe2r]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN0-1147]]
* Gene: [[SJ16939]]
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* [[SUCCCOASYN-RXN]]
** Category: [[annotation]]
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[SUCL_LPAREN_gdp_RPAREN_m]]
* Gene: [[SJ02903]]
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== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
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{{#set: common-name=succinyl-coa}}
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: inchi-key=inchikey=vnoyujkhfwywir-itiydsspsa-i}}
== Pathway(s)  ==
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{{#set: molecular-weight=862.568}}
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
 
** '''6''' reactions found over '''21''' reactions in the full pathway
 
* [[PWY-7799]], Arg/N-end rule pathway (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7799 PWY-7799]
 
** '''7''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=methionine aminopeptidase}}
 
{{#set: ec-number=ec-3.4.11.18}}
 
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite SUC-COA

  • common-name:
    • succinyl-coa
  • smiles:
    • cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)ccc(=o)[o-])cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • vnoyujkhfwywir-itiydsspsa-i
  • molecular-weight:
    • 862.568

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality