Difference between revisions of "SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 3.4.21.105-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.4.21.105 ec-3.4.21.105] == Reaction formula ==...")
(Created page with "Category:reaction == Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN == * direction: ** reversible * common-name: ** glutaconyl-coa decarboxylase * ec-number: ** [http://enzyme....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.4.21.105-RXN ==
+
== Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** glutaconyl-coa decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.21.105 ec-3.4.21.105]
+
** [http://enzyme.expasy.org/EC/4.1.1.70 ec-4.1.1.70]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Type-1-transmemberane-domains]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Cleaved-type-1-transmembrane-domains]][c]
+
* 1 [[GLUTACONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CROTONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19606]]
+
* Gene: [[SJ07909]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate):
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5177]], glutaryl-CoA degradation:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: ec-number=ec-3.4.21.105}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23972 23972]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03028 R03028]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=glutaconyl-coa decarboxylase}}
 +
{{#set: ec-number=ec-4.1.1.70}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:21, 15 January 2021

Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN

  • direction:
    • reversible
  • common-name:
    • glutaconyl-coa decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate):
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5177, glutaryl-CoA degradation:
    • 5 reactions found over 5 reactions in the full pathway
  • P162-PWY, L-glutamate degradation V (via hydroxyglutarate):
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN&oldid=114302"