Difference between revisions of "SUCDHm"
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(Created page with "Category:reaction == Reaction AKGDHe2r == * direction: ** reversible * common-name: ** 2-oxoglutarate dehydrogenase e2 component == Reaction formula == * 1.0 CO-A[m] '...") |
(Created page with "Category:reaction == Reaction 4.3.1.17-RXN == * direction: ** left-to-right * common-name: ** l-serine ammonia-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1.17...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction 4.3.1.17-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** l-serine ammonia-lyase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/4.3.1.17 ec-4.3.1.17] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[SER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ15468]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ08066]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19170 19170] |
− | {{#set: nb gene associated= | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00220 R00220] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M194 Q7M194] | ||
+ | ** [http://www.uniprot.org/uniprot/P30744 P30744] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JX54 Q9JX54] | ||
+ | ** [http://www.uniprot.org/uniprot/P56072 P56072] | ||
+ | ** [http://www.uniprot.org/uniprot/P25379 P25379] | ||
+ | ** [http://www.uniprot.org/uniprot/P16095 P16095] | ||
+ | ** [http://www.uniprot.org/uniprot/P20132 P20132] | ||
+ | ** [http://www.uniprot.org/uniprot/P09367 P09367] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PM51 Q9PM51] | ||
+ | ** [http://www.uniprot.org/uniprot/P17324 P17324] | ||
+ | ** [http://www.uniprot.org/uniprot/P80212 P80212] | ||
+ | ** [http://www.uniprot.org/uniprot/P80213 P80213] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=l-serine ammonia-lyase}} | ||
+ | {{#set: ec-number=ec-4.3.1.17}} | ||
+ | {{#set: nb gene associated=2}} | ||
{{#set: nb pathway associated=0}} | {{#set: nb pathway associated=0}} | ||
− | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}} |
Revision as of 15:38, 5 January 2021
Contents
Reaction 4.3.1.17-RXN
- direction:
- left-to-right
- common-name:
- l-serine ammonia-lyase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ15468
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ08066
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: