Difference between revisions of "Saturated-Fatty-Acyl-ACPs"

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(Created page with "Category:gene == Gene SJ07726 == * transcription-direction: ** negative * right-end-position: ** 486355 * left-end-position: ** 470861 * centisome-position: ** 53.2089...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12588 RXN-12588] == * direction: ** left-to-right * common-name: ** cysteine desulfurase * ec-n...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ07726 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12588 RXN-12588] ==
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* transcription-direction:
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* direction:
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** negative
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** left-to-right
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* right-end-position:
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* common-name:
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** 486355
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** cysteine desulfurase
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* left-end-position:
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* ec-number:
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** 470861
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** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
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* centisome-position:
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== Reaction formula ==
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** 53.2089   
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* 1 [[CYS]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) associated ==
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* Gene: [[SJ17324]]
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* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ09474]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-12195]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ19133]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-12196]]
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* Gene: [[SJ13485]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN0-5462]]
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* Gene: [[SJ04060]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) associated ==
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** Category: [[orthology]]
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* [[PWY-7210]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* Gene: [[SJ03223]]
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* [[PWY-7198]]
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** Category: [[annotation]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[PWY-7184]]
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</div>
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Pathway(s)  ==
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* [[PWY-6545]]
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== Reconstruction information  ==
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: transcription-direction=negative}}
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: right-end-position=486355}}
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== External links  ==
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{{#set: left-end-position=470861}}
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* RHEA:
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{{#set: centisome-position=53.2089    }}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43893 43893]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: direction=left-to-right}}
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{{#set: nb reaction associated=5}}
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{{#set: common-name=cysteine desulfurase}}
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{{#set: nb pathway associated=4}}
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{{#set: ec-number=ec-2.8.1.7}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:28, 27 August 2019

Reaction RXN-12588

  • direction:
    • left-to-right
  • common-name:
    • cysteine desulfurase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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