Difference between revisions of "Semiquinones"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-K+ ExchangeSeed-K+] == * direction: ** reversible == Reaction formula == * 1.0 K+[...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10841 RXN-10841] == * direction: ** reversible * common-name: ** all-trans-retinol dehydrogenas...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-K+ ExchangeSeed-K+] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10841 RXN-10841] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 +
* common-name:
 +
** all-trans-retinol dehydrogenase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.300 ec-1.1.1.300]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[K+]][C-BOUNDARY] '''<=>''' 1.0 [[K+]][e]
+
* 1 [[CPD-13524]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[RETINAL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ13034]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12574]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19151]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02723]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6857]], retinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6861]], the visual cycle I (vertebrates): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6861 PWY-6861]
 +
** '''1''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[unknown-tool]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25036 25036]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08379 R08379]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: nb gene associated=0}}
+
{{#set: common-name=all-trans-retinol dehydrogenase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-1.1.1.300}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb gene associated=4}}
−
{{#set: reconstruction tool=unknown-tool}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=import_from_medium}}
+
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction RXN-10841

  • direction:
    • reversible
  • common-name:
    • all-trans-retinol dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6857, retinol biosynthesis: PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6861, the visual cycle I (vertebrates): PWY-6861
    • 1 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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