Difference between revisions of "Sterol-3-beta-D-glucosides"

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(Created page with "Category:gene == Gene SJ02841 == * transcription-direction: ** positive * right-end-position: ** 34343 * left-end-position: ** 25961 * centisome-position: ** 4.870448...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERVAL-RXN BRANCHED-CHAINAMINOTRANSFERVAL-RXN] == * direction: ** reversibl...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ02841 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERVAL-RXN BRANCHED-CHAINAMINOTRANSFERVAL-RXN] ==
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* transcription-direction:
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* direction:
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** positive
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** reversible
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* right-end-position:
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* common-name:
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** 34343
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** valine transaminase
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* left-end-position:
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* ec-number:
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** 25961
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** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
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* centisome-position:
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== Reaction formula ==
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** 4.870448   
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[VAL]][c] '''<=>''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[GLT]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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* Gene: [[SJ17677]]
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== Reaction(s) associated ==
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** Category: [[orthology]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[3.1.1.64-RXN]]
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* Gene: [[SJ06412]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[CARBOXYLESTERASE-RXN]]
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** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04586]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[PHOSPHOLIPASE-A1-RXN]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[PHOSPHOLIPASE-A2-RXN]]
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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** Category: [[annotation]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-10711]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-10767]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12252]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12430]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12575]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-15065]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-15067]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-15068]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-16138]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-16139]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17735]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17736]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-6725]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-6952]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXNQT-4366]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[LIPASYN-PWY]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6803]]
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6303]]
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* [[ALANINE-VALINESYN-PWY]], L-alanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-VALINESYN-PWY ALANINE-VALINESYN-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6857]]
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* [[PWY-5057]], L-valine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057]
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7416]]
 
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7409]]
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== Reconstruction information  ==
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PWY-7417]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== External links  ==
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* [[PWY66-397]]
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* RHEA:
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** '''1''' reactions found over '''11''' reactions in the full pathway
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24816 24816]
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* [[PWY66-395]]
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* LIGAND-RXN:
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** '''1''' reactions found over '''10''' reactions in the full pathway
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** [http://www.genome.jp/dbget-bin/www_bget?R01214 R01214]
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* [[PWY66-394]]
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* UNIPROT:
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** '''1''' reactions found over '''6''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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* [[PWY-7783]]
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P47176 P47176]
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</div>
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** [http://www.uniprot.org/uniprot/O86505 O86505]
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{{#set: transcription-direction=positive}}
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** [http://www.uniprot.org/uniprot/O14370 O14370]
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{{#set: right-end-position=34343}}
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** [http://www.uniprot.org/uniprot/O32954 O32954]
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{{#set: left-end-position=25961}}
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** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
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{{#set: centisome-position=4.870448    }}
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{{#set: direction=reversible}}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: common-name=valine transaminase}}
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{{#set: nb reaction associated=20}}
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{{#set: ec-number=ec-2.6.1.42}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:24, 26 August 2019

Reaction BRANCHED-CHAINAMINOTRANSFERVAL-RXN

  • direction:
    • reversible
  • common-name:
    • valine transaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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