Difference between revisions of "TCP26"

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(Created page with "Category:reaction == Reaction RXN-7241 == * direction: ** left-to-right * common-name: ** myo-inositol-hexakisphosphate 4-phosphohydrolase * ec-number: ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction PHOSMANMUT-RXN == * direction: ** reversible * common-name: ** phosphomannomutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.8 ec-5.4...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7241 ==
+
== Reaction PHOSMANMUT-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** myo-inositol-hexakisphosphate 4-phosphohydrolase
+
** phosphomannomutase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.26 ec-3.1.3.26]
+
** [http://enzyme.expasy.org/EC/5.4.2.8 ec-5.4.2.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MI-HEXAKISPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-6741]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[MANNOSE-1P]][c] '''<=>''' 1 [[CPD-15979]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04752]]
+
* Gene: [[SJ02279]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ04753]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14545]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4702]], phytate degradation I:
+
* [[PWY-5659]], GDP-mannose biosynthesis:
−
** '''3''' reactions found over '''14''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7456]], &beta;-(1,4)-mannan degradation:
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7586]], &beta;-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway):
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20961 20961]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11143 11143]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03372 R03372]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01818 R01818]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: common-name=myo-inositol-hexakisphosphate 4-phosphohydrolase}}
+
** [http://www.uniprot.org/uniprot/P26276 P26276]
−
{{#set: ec-number=ec-3.1.3.26}}
+
** [http://www.uniprot.org/uniprot/P29955 P29955]
 +
** [http://www.uniprot.org/uniprot/P24175 P24175]
 +
** [http://www.uniprot.org/uniprot/P07283 P07283]
 +
** [http://www.uniprot.org/uniprot/P47723 P47723]
 +
** [http://www.uniprot.org/uniprot/Q57842 Q57842]
 +
** [http://www.uniprot.org/uniprot/P47299 P47299]
 +
** [http://www.uniprot.org/uniprot/Q59428 Q59428]
 +
** [http://www.uniprot.org/uniprot/Q06951 Q06951]
 +
** [http://www.uniprot.org/uniprot/Q49913 Q49913]
 +
** [http://www.uniprot.org/uniprot/P75050 P75050]
 +
** [http://www.uniprot.org/uniprot/Q51847 Q51847]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=phosphomannomutase}}
 +
{{#set: ec-number=ec-5.4.2.8}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:23, 15 January 2021

Reaction PHOSMANMUT-RXN

  • direction:
    • reversible
  • common-name:
    • phosphomannomutase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5659, GDP-mannose biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7456, β-(1,4)-mannan degradation:
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7586, β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-882, L-ascorbate biosynthesis I (L-galactose pathway):
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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