Difference between revisions of "TCP26"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2881 PWY-2881] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-31...")
(Created page with "Category:reaction == Reaction PHOSMANMUT-RXN == * direction: ** reversible * common-name: ** phosphomannomutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.8 ec-5.4...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2881 PWY-2881] ==
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== Reaction PHOSMANMUT-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-3193]
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** reversible
 
* common-name:
 
* common-name:
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** cytokinins 7-n-glucoside biosynthesis
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** phosphomannomutase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-4733]]
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** [http://enzyme.expasy.org/EC/5.4.2.8 ec-5.4.2.8]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4721 RXN-4721]
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* 1 [[MANNOSE-1P]][c] '''<=>''' 1 [[CPD-15979]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4727 RXN-4727]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4736 RXN-4736]
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* Gene: [[SJ02279]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4729 RXN-4729]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4731 RXN-4731]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4724 RXN-4724]
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** Category: [[orthology]]
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{{#set: taxonomic-range=tax-3193}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=cytokinins 7-n-glucoside biosynthesis}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=1}}
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* Gene: [[SJ14545]]
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{{#set: completion rate=0.14}}
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** Category: [[annotation]]
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{{#set: nb total reaction=7}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-5659]], GDP-mannose biosynthesis:
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7456]], &beta;-(1,4)-mannan degradation:
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7586]], &beta;-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway):
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** '''6''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11143 11143]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01818 R01818]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P26276 P26276]
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** [http://www.uniprot.org/uniprot/P29955 P29955]
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** [http://www.uniprot.org/uniprot/P24175 P24175]
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** [http://www.uniprot.org/uniprot/P07283 P07283]
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** [http://www.uniprot.org/uniprot/P47723 P47723]
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** [http://www.uniprot.org/uniprot/Q57842 Q57842]
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** [http://www.uniprot.org/uniprot/P47299 P47299]
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** [http://www.uniprot.org/uniprot/Q59428 Q59428]
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** [http://www.uniprot.org/uniprot/Q06951 Q06951]
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** [http://www.uniprot.org/uniprot/Q49913 Q49913]
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** [http://www.uniprot.org/uniprot/P75050 P75050]
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** [http://www.uniprot.org/uniprot/Q51847 Q51847]
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{{#set: direction=reversible}}
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{{#set: common-name=phosphomannomutase}}
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{{#set: ec-number=ec-5.4.2.8}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:42, 18 December 2020

Reaction PHOSMANMUT-RXN

  • direction:
    • reversible
  • common-name:
    • phosphomannomutase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5659, GDP-mannose biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7456, β-(1,4)-mannan degradation:
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7586, β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-882, L-ascorbate biosynthesis I (L-galactose pathway):
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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