Difference between revisions of "THFOR2"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-401 PWY-401] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-330...")
(Created page with "Category:reaction == Reaction LINOLENOYL-RXN == * direction: ** left-to-right * common-name: ** long-chain fatty acid-coa ligase ** acyl-coa synthetase * ec-number: ** [ht...")
Line 1: Line 1:
−
[[Category:pathway]]
+
[[Category:reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-401 PWY-401] ==
+
== Reaction LINOLENOYL-RXN ==
−
* taxonomic-range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
+
** left-to-right
 
* common-name:
 
* common-name:
−
** galactolipid biosynthesis i
+
** long-chain fatty acid-coa ligase
−
== Reaction(s) found ==
+
** acyl-coa synthetase
−
* [[2.4.1.46-RXN]]
+
* ec-number:
−
* [[RXN-1225]]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
−
== Reaction(s) not found ==
+
== Reaction formula ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1226 RXN-1226]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[LINOLENIC_ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[PPI]][c]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9721 RXN-9721]
+
== Gene(s) associated with this reaction  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16635 RXN-16635]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: taxonomic-range=tax-33090}}
+
* Gene: [[SJ08692]]
−
{{#set: common-name=galactolipid biosynthesis i}}
+
** Category: [[annotation]]
−
{{#set: nb reaction found=2}}
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
{{#set: completion rate=0.4}}
+
* Gene: [[SJ08690]]
−
{{#set: nb total reaction=5}}
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03650]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08691]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13972]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 +
== Pathway(s) ==
 +
* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=long-chain fatty acid-coa ligase|acyl-coa synthetase}}
 +
{{#set: ec-number=ec-6.2.1.3}}
 +
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:44, 18 December 2020

Reaction LINOLENOYL-RXN

  • direction:
    • left-to-right
  • common-name:
    • long-chain fatty acid-coa ligase
    • acyl-coa synthetase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7049, icosapentaenoate biosynthesis II (6-desaturase, mammals):
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals):
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=THFOR2&oldid=50750"