Difference between revisions of "THIAZOLSYN3-RXN"

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(Created page with "Category:reaction == Reaction 3.5.1.27-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88] == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction R-2-METHYLMALATE-DEHYDRATASE-RXN == * direction: ** reversible * common-name: ** (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming) * e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.5.1.27-RXN ==
+
== Reaction R-2-METHYLMALATE-DEHYDRATASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88]
+
** [http://enzyme.expasy.org/EC/4.2.1.35 ec-4.2.1.35]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Charged-fMET-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[L-Methionylaminoacyl-tRNAs]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-31]][c] '''<=>''' 1 [[2-METHYLMALEATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06192]]
+
* Gene: [[SJ09771]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22396]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5101]], L-isoleucine biosynthesis II:
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7698]], 2,5-xylenol and 3,5-xylenol degradation:
 +
** '''1''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22332 22332]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04268 R04268]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03896 R03896]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P44786 P44786]
+
{{#set: common-name=(r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)}}
−
** [http://www.uniprot.org/uniprot/P0A6K3 P0A6K3]
+
{{#set: ec-number=ec-4.2.1.35}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb gene associated=2}}
−
{{#set: ec-number=ec-3.5.1.88}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:04, 5 January 2021

Reaction R-2-METHYLMALATE-DEHYDRATASE-RXN

  • direction:
    • reversible
  • common-name:
    • (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5101, L-isoleucine biosynthesis II:
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7698, 2,5-xylenol and 3,5-xylenol degradation:
    • 1 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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