Difference between revisions of "THREODEHYD-RXN"

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(Created page with "Category:reaction == Reaction RXN-7985 == * direction: ** left-to-right * common-name: ** violaxanthin de-epoxidase ** antheraxanthin de-epoxidase * synonymous: ** vde ==...")
(Created page with "Category:reaction == Reaction THREODEHYD-RXN == * direction: ** left-to-right * common-name: ** threonine dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1....")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7985 ==
+
== Reaction THREODEHYD-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** violaxanthin de-epoxidase
+
** threonine dehydrogenase
−
** antheraxanthin de-epoxidase
+
* ec-number:
−
* synonymous:
+
** [http://enzyme.expasy.org/EC/1.1.1.103 ec-1.1.1.103]
−
** vde
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ASCORBATE]][c] '''+''' 1 [[CPD1F-131]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[THR]][c] '''=>''' 1 [[AMINO-OXOBUT]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19927]]
+
* Gene: [[SJ09862]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03764]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20456]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion:
+
* [[PWY-7378]], aminopropanol phosphate biosynthesis II:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[THREONINE-DEG2-PWY]], L-threonine degradation II:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[THRDLCTCAT-PWY]], L-threonine degradation III (to methylglyoxal):
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR103402
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21801 21801]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13162 13162]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07179 R07179]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01465 R01465]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O31776 O31776]
 +
** [http://www.uniprot.org/uniprot/P07913 P07913]
 +
** [http://www.uniprot.org/uniprot/Q9UYX0 Q9UYX0]
 +
** [http://www.uniprot.org/uniprot/O34268 O34268]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=violaxanthin de-epoxidase|antheraxanthin de-epoxidase}}
+
{{#set: common-name=threonine dehydrogenase}}
−
{{#set: synonymous=vde}}
+
{{#set: ec-number=ec-1.1.1.103}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction THREODEHYD-RXN

  • direction:
    • left-to-right
  • common-name:
    • threonine dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7378, aminopropanol phosphate biosynthesis II:
    • 1 reactions found over 4 reactions in the full pathway
  • THREONINE-DEG2-PWY, L-threonine degradation II:
    • 2 reactions found over 2 reactions in the full pathway
  • THRDLCTCAT-PWY, L-threonine degradation III (to methylglyoxal):
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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