Difference between revisions of "THREONINE--TRNA-LIGASE-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-12...")
 
(Created page with "Category:reaction == Reaction THREONINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** threonine-trna ligase * ec-number: ** [http://enzyme.expasy.org...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY] ==
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== Reaction THREONINE--TRNA-LIGASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-1224]
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** left-to-right
 
* common-name:
 
* common-name:
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** protocatechuate degradation i (meta-cleavage pathway)
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** threonine-trna ligase
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== Reaction(s) found ==
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* ec-number:
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* [[OXALODECARB-RXN]]
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** [http://enzyme.expasy.org/EC/6.1.1.3 ec-6.1.1.3]
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* [[RXN-2464]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[ATP]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[THR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-THR-tRNAs]][c] '''+''' 1 [[PPI]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-45-DIOXYGENASE-RXN PROTOCATECHUATE-45-DIOXYGENASE-RXN]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2463 RXN-2463]
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* Gene: [[SJ03199]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9983 RXN-9983]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.45-RXN 1.2.1.45-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2462 RXN-2462]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R107-RXN R107-RXN]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: taxonomic-range=tax-1224}}
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* Gene: [[SJ20100]]
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{{#set: common-name=protocatechuate degradation i (meta-cleavage pathway)}}
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** Category: [[annotation]]
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{{#set: nb reaction found=2}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=0.25}}
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* Gene: [[SJ17482]]
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{{#set: nb total reaction=8}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) ==
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR123912
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24625 24625]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/O83809 O83809]
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** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
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** [http://www.uniprot.org/uniprot/P56071 P56071]
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** [http://www.uniprot.org/uniprot/O58430 O58430]
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** [http://www.uniprot.org/uniprot/P47615 P47615]
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** [http://www.uniprot.org/uniprot/O05947 O05947]
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** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
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** [http://www.uniprot.org/uniprot/O67583 O67583]
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** [http://www.uniprot.org/uniprot/O27504 O27504]
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** [http://www.uniprot.org/uniprot/O51662 O51662]
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** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
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** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
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** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
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** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
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** [http://www.uniprot.org/uniprot/P43014 P43014]
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** [http://www.uniprot.org/uniprot/P46244 P46244]
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** [http://www.uniprot.org/uniprot/P75225 P75225]
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** [http://www.uniprot.org/uniprot/Q48989 Q48989]
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** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
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** [http://www.uniprot.org/uniprot/O04630 O04630]
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** [http://www.uniprot.org/uniprot/P18255 P18255]
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** [http://www.uniprot.org/uniprot/P18256 P18256]
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** [http://www.uniprot.org/uniprot/P04801 P04801]
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** [http://www.uniprot.org/uniprot/P07236 P07236]
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** [http://www.uniprot.org/uniprot/P26639 P26639]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=threonine-trna ligase}}
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{{#set: ec-number=ec-6.1.1.3}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction THREONINE--TRNA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • threonine-trna ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=THREONINE--TRNA-LIGASE-RXN&oldid=142961"