Difference between revisions of "THYMIDINE-TRIPHOSPHATASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-6883 == * direction: ** left-to-right * common-name: ** ubiquinol:oxygen oxidoreductase * ec-number: ** [http://enzyme.expasy.org/EC/1.10...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CPD-3 == * direction: ** reversible == Reaction formula == * 1.0 CPD-3[C-BOUNDARY] '''<=>''' 1.0 CPD-3[e] == Gene(s) ass...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-6883 ==
+
== Reaction ExchangeSeed-CPD-3 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** ubiquinol:oxygen oxidoreductase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.10.3.11 ec-1.10.3.11]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[Ubiquinols]][c] '''=>''' 2 [[Ubiquinones]][c] '''+''' 2 [[WATER]][c]
+
* 1.0 [[CPD-3]][C-BOUNDARY] '''<=>''' 1.0 [[CPD-3]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08130]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ12321]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00758]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R09504 R09504]
+
{{#set: nb gene associated=0}}
−
* RHEA:
+
{{#set: nb pathway associated=0}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30258 30258]
+
{{#set: reconstruction category=manual}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: common-name=ubiquinol:oxygen oxidoreductase}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: ec-number=ec-1.10.3.11}}
+
{{#set: reconstruction source=import_from_medium}}
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 15:36, 5 January 2021

Reaction ExchangeSeed-CPD-3

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=THYMIDINE-TRIPHOSPHATASE-RXN&oldid=76998"