Difference between revisions of "TPH"

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(Created page with "Category:reaction == Reaction QUERCETIN-3-O-METHYLTRANSFERASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.76 ec-2.1.1.76] == Re...")
(Created page with "Category:reaction == Reaction 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN == * direction: ** left-to-right * common-name: ** 3',5'-cyclic-gmp phosphodiesterase * ec-number: ** [ht...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction QUERCETIN-3-O-METHYLTRANSFERASE-RXN ==
+
== Reaction 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 3',5'-cyclic-gmp phosphodiesterase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.76 ec-2.1.1.76]
+
** [http://enzyme.expasy.org/EC/3.1.4.35 ec-3.1.4.35]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-520]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[3457-TETRAHYDROXY-3-METHOXYFLAVONE]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CGMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07699]]
+
* Gene: [[SJ18680]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ10724]]
+
* Gene: [[SJ14526]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ09797]]
+
* Gene: [[SJ09726]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6064]], methylquercetin biosynthesis:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7161]], polymethylated quercetin biosynthesis:
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17674 17674]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16958 16958]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02157 R02157]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01234 R01234]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P04972 P04972]
 +
** [http://www.uniprot.org/uniprot/P16586 P16586]
 +
** [http://www.uniprot.org/uniprot/P23439 P23439]
 +
** [http://www.uniprot.org/uniprot/P35913 P35913]
 +
** [http://www.uniprot.org/uniprot/P33726 P33726]
 +
** [http://www.uniprot.org/uniprot/P09174 P09174]
 +
** [http://www.uniprot.org/uniprot/P52731 P52731]
 +
** [http://www.uniprot.org/uniprot/P51160 P51160]
 +
** [http://www.uniprot.org/uniprot/P18545 P18545]
 +
** [http://www.uniprot.org/uniprot/O76074 O76074]
 +
** [http://www.uniprot.org/uniprot/P11541 P11541]
 +
** [http://www.uniprot.org/uniprot/P27664 P27664]
 +
** [http://www.uniprot.org/uniprot/Q62037 Q62037]
 +
** [http://www.uniprot.org/uniprot/P23440 P23440]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.1.1.76}}
+
{{#set: common-name=3',5'-cyclic-gmp phosphodiesterase}}
 +
{{#set: ec-number=ec-3.1.4.35}}
 
{{#set: nb gene associated=3}}
 
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:05, 14 January 2021

Reaction 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • 3',5'-cyclic-gmp phosphodiesterase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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