Difference between revisions of "TPH"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN == * direction: ** left-to-right * common-name: ** 3',5'-cyclic-gmp phosphodiesterase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction TPH == * direction: ** left-to-right * common-name: ** thymidylate 5'-phosphohydrolase == Reaction formula == * 1.0 TMP[c] '''+''' 1.0 ...")
 
(2 intermediate revisions by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN ==
+
== Reaction TPH ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3',5'-cyclic-gmp phosphodiesterase
+
** thymidylate 5'-phosphohydrolase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.1.4.35 ec-3.1.4.35]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CGMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[TMP]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[Pi]][c] '''+''' 1.0 [[THYMIDINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18680]]
+
* Gene: [[SJ04587]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ14526]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ09726]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16958 16958]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01234 R01234]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P04972 P04972]
 
−
** [http://www.uniprot.org/uniprot/P16586 P16586]
 
−
** [http://www.uniprot.org/uniprot/P23439 P23439]
 
−
** [http://www.uniprot.org/uniprot/P35913 P35913]
 
−
** [http://www.uniprot.org/uniprot/P33726 P33726]
 
−
** [http://www.uniprot.org/uniprot/P09174 P09174]
 
−
** [http://www.uniprot.org/uniprot/P52731 P52731]
 
−
** [http://www.uniprot.org/uniprot/P51160 P51160]
 
−
** [http://www.uniprot.org/uniprot/P18545 P18545]
 
−
** [http://www.uniprot.org/uniprot/O76074 O76074]
 
−
** [http://www.uniprot.org/uniprot/P11541 P11541]
 
−
** [http://www.uniprot.org/uniprot/P27664 P27664]
 
−
** [http://www.uniprot.org/uniprot/Q62037 Q62037]
 
−
** [http://www.uniprot.org/uniprot/P23440 P23440]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3',5'-cyclic-gmp phosphodiesterase}}
+
{{#set: common-name=thymidylate 5'-phosphohydrolase}}
−
{{#set: ec-number=ec-3.1.4.35}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:23, 18 March 2021

Reaction TPH

  • direction:
    • left-to-right
  • common-name:
    • thymidylate 5'-phosphohydrolase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=TPH&oldid=142298"