Difference between revisions of "TRANS-D2-ENOYL-COA"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN] == * direction: ** left-to-right * common-name: ** for...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1124 RXN-1124] == * direction: ** reversible == Reaction formula == * 1 NADPH[c] '''+''' 1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1124 RXN-1124] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** formyltetrahydrofolate deformylase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.5.1.10 ec-3.5.1.10]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SINAPOYL-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[SINAPALDEHYDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15379]]
+
* Gene: [[SJ06064]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12213]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21972]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7909]], formaldehyde oxidation VII (THF pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7909 PWY-7909]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 
−
** '''6''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19834 19834]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02220 R02220]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P37051 P37051]
+
{{#set: nb gene associated=3}}
−
** [http://www.uniprot.org/uniprot/Q03432 Q03432]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q9PPC9 Q9PPC9]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q46339 Q46339]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=formyltetrahydrofolate deformylase}}
 
−
{{#set: ec-number=ec-3.5.1.10}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:24, 26 August 2019

Reaction RXN-1124

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=TRANS-D2-ENOYL-COA&oldid=21291"