Difference between revisions of "TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-10745 == * direction: ** left-to-right * common-name: ** nad(p)h oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.6.3.1 ec-1.6.3.1]...")
(Created page with "Category:reaction == Reaction RXN66-13 == * direction: ** left-to-right * common-name: ** 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol deformylase ** 4,...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10745 ==
+
== Reaction RXN66-13 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nad(p)h oxidase
+
** 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol deformylase
−
* ec-number:
+
** 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol,nadph:oxygen oxidoreductase
−
** [http://enzyme.expasy.org/EC/1.6.3.1 ec-1.6.3.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
* 1 [[CPD-8608]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-8609]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ05072]]
−
* Gene: [[SJ21871]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ15786]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04490]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ20902]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ13844]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07838]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13845]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10966]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02571]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02559]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol):
 +
** '''12''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11267 11267]
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11263 11263]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07172 R07172]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nad(p)h oxidase}}
+
{{#set: common-name=4,4-dimethyl-14&alpha;-formyl-5&alpha;-cholesta-8-en-3&beta;-ol deformylase|4,4-dimethyl-14&alpha;-formyl-5&alpha;-cholesta-8-en-3&beta;-ol,nadph:oxygen oxidoreductase}}
−
{{#set: ec-number=ec-1.6.3.1}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:24, 15 January 2021

Reaction RXN66-13

  • direction:
    • left-to-right
  • common-name:
    • 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol deformylase
    • 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol,nadph:oxygen oxidoreductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-3, cholesterol biosynthesis II (via 24,25-dihydrolanosterol):
    • 12 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN&oldid=115849"