Difference between revisions of "TRANS-RXN-137"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12003 RXN-12003] == * direction: ** reversible * common-name: ** protein-ribulosamine 3-kinase...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-O-ACETTRAN-RXN SERINE-O-ACETTRAN-RXN] == * direction: ** left-to-right * common-name: ** ser...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12003 RXN-12003] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-O-ACETTRAN-RXN SERINE-O-ACETTRAN-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** protein-ribulosamine 3-kinase
+
** serine acetyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.172 ec-2.7.1.172]
+
** [http://enzyme.expasy.org/EC/2.3.1.30 ec-2.3.1.30]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[Protein-ribulosamines]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Protein-phospho-ribulosamines]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[ACETYLSERINE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07189]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ14691]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ05139]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15518]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00718]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14890]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7870]], L-cysteine biosynthesis VII (from S-sulfo-L-cysteine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7870 PWY-7870]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7274]], D-cycloserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7274 PWY-7274]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[CYSTSYN-PWY]], L-cysteine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTSYN-PWY CYSTSYN-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6936]], seleno-amino acid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=protein-ribulosamine 3-kinase}}
+
* RHEA:
−
{{#set: ec-number=ec-2.7.1.172}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24560 24560]
−
{{#set: nb gene associated=2}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00586 R00586]
−
{{#set: reconstruction category=annotation}}
+
* UNIPROT:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q39533 Q39533]
 +
** [http://www.uniprot.org/uniprot/Q06750 Q06750]
 +
** [http://www.uniprot.org/uniprot/P71405 P71405]
 +
** [http://www.uniprot.org/uniprot/Q9JR86 Q9JR86]
 +
** [http://www.uniprot.org/uniprot/Q9PPF6 Q9PPF6]
 +
** [http://www.uniprot.org/uniprot/P23145 P23145]
 +
** [http://www.uniprot.org/uniprot/Q9CEI8 Q9CEI8]
 +
** [http://www.uniprot.org/uniprot/P43886 P43886]
 +
** [http://www.uniprot.org/uniprot/P32003 P32003]
 +
** [http://www.uniprot.org/uniprot/P29847 P29847]
 +
** [http://www.uniprot.org/uniprot/Q42588 Q42588]
 +
** [http://www.uniprot.org/uniprot/Q39218 Q39218]
 +
** [http://www.uniprot.org/uniprot/Q42538 Q42538]
 +
** [http://www.uniprot.org/uniprot/P74089 P74089]
 +
** [http://www.uniprot.org/uniprot/Q8W2B8 Q8W2B8]
 +
** [http://www.uniprot.org/uniprot/Q8S895 Q8S895]
 +
** [http://www.uniprot.org/uniprot/P93544 P93544]
 +
** [http://www.uniprot.org/uniprot/O69218 O69218]
 +
** [http://www.uniprot.org/uniprot/O32979 O32979]
 +
** [http://www.uniprot.org/uniprot/P0A9D4 P0A9D4]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=serine acetyltransferase}}
 +
{{#set: ec-number=ec-2.3.1.30}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}

Revision as of 09:30, 27 August 2019

Reaction SERINE-O-ACETTRAN-RXN

  • direction:
    • left-to-right
  • common-name:
    • serine acetyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7870, L-cysteine biosynthesis VII (from S-sulfo-L-cysteine): PWY-7870
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7274, D-cycloserine biosynthesis: PWY-7274
    • 1 reactions found over 6 reactions in the full pathway
  • CYSTSYN-PWY, L-cysteine biosynthesis I: CYSTSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6936, seleno-amino acid biosynthesis (plants): PWY-6936
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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