Difference between revisions of "TRANS-RXN-2"

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(Created page with "Category:reaction == Reaction GLUTKIN-RXN == * direction: ** left-to-right * common-name: ** glutamate 5-kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.11 ec-2....")
(Created page with "Category:reaction == Reaction TRANS-RXN-2 == * direction: ** left-to-right * common-name: ** potassium-transporting atpase * ec-number: ** [http://enzyme.expasy.org/EC/3.6...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTKIN-RXN ==
+
== Reaction TRANS-RXN-2 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate 5-kinase
+
** potassium-transporting atpase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.2.11 ec-2.7.2.11]
+
** [http://enzyme.expasy.org/EC/3.6.3.12 ec-3.6.3.12]
 +
* synonymous:
 +
** potassium-importing atpase
 +
** k(+)-importing atpase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-GLUTAMATE-5-P]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[K+]][e] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[K+]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02923]]
+
* Gene: [[SJ05555]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ09035]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06433]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ08886]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ22406]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ09366]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-3341]], L-proline biosynthesis III (from L-ornithine):
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PROSYN-PWY]], L-proline biosynthesis I (from L-glutamate):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR100277
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14878 14878]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16778 16778]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00239 R00239]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9PJ29 Q9PJ29]
 
−
** [http://www.uniprot.org/uniprot/Q9CF72 Q9CF72]
 
−
** [http://www.uniprot.org/uniprot/Q9JUK7 Q9JUK7]
 
−
** [http://www.uniprot.org/uniprot/P43763 P43763]
 
−
** [http://www.uniprot.org/uniprot/P0A7B5 P0A7B5]
 
−
** [http://www.uniprot.org/uniprot/P17856 P17856]
 
−
** [http://www.uniprot.org/uniprot/P32264 P32264]
 
−
** [http://www.uniprot.org/uniprot/P73071 P73071]
 
−
** [http://www.uniprot.org/uniprot/O04226 O04226]
 
−
** [http://www.uniprot.org/uniprot/O13810 O13810]
 
−
** [http://www.uniprot.org/uniprot/P46546 P46546]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamate 5-kinase}}
+
{{#set: common-name=potassium-transporting atpase}}
−
{{#set: ec-number=ec-2.7.2.11}}
+
{{#set: ec-number=ec-3.6.3.12}}
−
{{#set: nb gene associated=4}}
+
{{#set: synonymous=potassium-importing atpase|k(+)-importing atpase}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb gene associated=3}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction TRANS-RXN-2

  • direction:
    • left-to-right
  • common-name:
    • potassium-transporting atpase
  • ec-number:
  • synonymous:
    • potassium-importing atpase
    • k(+)-importing atpase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links






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