Difference between revisions of "TRANSENOYLCOARED-RXN"

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(Created page with "Category:reaction == Reaction RXN-11357 == * direction: ** left-to-right * common-name: ** 9,9′-dicis-ζ-carotene desaturase ** 7,9,9'-cis-neurosporene desaturas...")
(Created page with "Category:reaction == Reaction RXN-16040 == * direction: ** left-to-right * common-name: ** γ-linolenoyl-lipid ω3 desaturase * ec-number: ** [http://enzyme.expa...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11357 ==
+
== Reaction RXN-16040 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 9,9′-dicis-ζ-carotene desaturase
+
** γ-linolenoyl-lipid ω3 desaturase
** 7,9,9'-cis-neurosporene desaturase
+
* ec-number:
* synonymous:
+
** [http://enzyme.expasy.org/EC/1.14.19.25 ec-1.14.19.25]
** ζ-carotene desaturase
 
** zds
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-7524]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[CPD-7496]][c] '''+''' 1 [[ETR-Quinols]][c]
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* 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[Gamma-linolenoyl-groups]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-17278]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ05680]]
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* Gene: [[SJ03069]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
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* Gene: [[SJ09228]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ05681]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR119794
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30964 30964]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=9,9′-dicis-ζ-carotene desaturase|7,9,9'-cis-neurosporene desaturase}}
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{{#set: common-name=γ-linolenoyl-lipid ω3 desaturase}}
{{#set: synonymous=zds|ζ-carotene desaturase}}
+
{{#set: ec-number=ec-1.14.19.25}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:35, 15 March 2021

Reaction RXN-16040

  • direction:
    • left-to-right
  • common-name:
    • γ-linolenoyl-lipid ω3 desaturase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR119794