Difference between revisions of "TREHALA-RXN"

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(Created page with "Category:reaction == Reaction D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN == * direction: ** left-to-right * common-name: ** lactate dehydrogenase ** d-lactate dehydrogenase (c...")
(Created page with "Category:reaction == Reaction TREHALA-RXN == * direction: ** left-to-right * common-name: ** trehalase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.28 ec-3.2.1.28] =...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN ==
+
== Reaction TREHALA-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** lactate dehydrogenase
+
** trehalase
−
** d-lactate dehydrogenase (cytochrome)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.2.4 ec-1.1.2.4]
+
** [http://enzyme.expasy.org/EC/3.2.1.28 ec-3.2.1.28]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[Cytochromes-C-Oxidized]][c] '''+''' 1 [[D-LACTATE]][c] '''=>''' 2 [[Cytochromes-C-Reduced]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[TREHALOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALPHA-GLUCOSE]][c] '''+''' 1 [[GLC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21294]]
+
* Gene: [[SJ04583]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ20537]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MGLDLCTANA-PWY]], methylglyoxal degradation VI:
+
* [[PWY0-1182]], trehalose degradation II (cytosolic):
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1466]], trehalose degradation VI (periplasmic):
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR124067
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13522 13522]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20869 20869]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00197 R00197]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00010 R00010]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q12627 Q12627]
+
** [http://www.uniprot.org/uniprot/P19813 P19813]
−
** [http://www.uniprot.org/uniprot/P32891 P32891]
+
** [http://www.uniprot.org/uniprot/O43280 O43280]
 +
** [http://www.uniprot.org/uniprot/P13482 P13482]
 +
** [http://www.uniprot.org/uniprot/P32359 P32359]
 +
** [http://www.uniprot.org/uniprot/P32358 P32358]
 +
** [http://www.uniprot.org/uniprot/P35172 P35172]
 +
** [http://www.uniprot.org/uniprot/P62601 P62601]
 +
** [http://www.uniprot.org/uniprot/P32356 P32356]
 +
** [http://www.uniprot.org/uniprot/P48016 P48016]
 +
** [http://www.uniprot.org/uniprot/P78922 P78922]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=lactate dehydrogenase|d-lactate dehydrogenase (cytochrome)}}
+
{{#set: common-name=trehalase}}
−
{{#set: ec-number=ec-1.1.2.4}}
+
{{#set: ec-number=ec-3.2.1.28}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction TREHALA-RXN

  • direction:
    • left-to-right
  • common-name:
    • trehalase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1182, trehalose degradation II (cytosolic):
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-1466, trehalose degradation VI (periplasmic):
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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