Difference between revisions of "TREHALA-RXN"

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(Created page with "Category:reaction == Reaction DAPASYN-RXN == * direction: ** reversible * common-name: ** 7,8-diaminopelargonic acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction TREHALA-RXN == * direction: ** left-to-right * common-name: ** trehalase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.28 ec-3.2.1.28] =...")
 
(4 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DAPASYN-RXN ==
+
== Reaction TREHALA-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 7,8-diaminopelargonic acid synthase
+
** trehalase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.62 ec-2.6.1.62]
+
** [http://enzyme.expasy.org/EC/3.2.1.28 ec-3.2.1.28]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''<=>''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c]
+
* 1 [[TREHALOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALPHA-GLUCOSE]][c] '''+''' 1 [[GLC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14599]]
+
* Gene: [[SJ04583]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
+
* [[PWY0-1182]], trehalose degradation II (cytosolic):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1466]], trehalose degradation VI (periplasmic):
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR124067
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16864 16864]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20869 20869]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03231 R03231]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00010 R00010]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q58696 Q58696]
+
** [http://www.uniprot.org/uniprot/P19813 P19813]
−
** [http://www.uniprot.org/uniprot/P53555 P53555]
+
** [http://www.uniprot.org/uniprot/O43280 O43280]
−
** [http://www.uniprot.org/uniprot/P44426 P44426]
+
** [http://www.uniprot.org/uniprot/P13482 P13482]
−
** [http://www.uniprot.org/uniprot/Q9JV96 Q9JV96]
+
** [http://www.uniprot.org/uniprot/P32359 P32359]
−
** [http://www.uniprot.org/uniprot/Q9PIJ2 Q9PIJ2]
+
** [http://www.uniprot.org/uniprot/P32358 P32358]
−
** [http://www.uniprot.org/uniprot/P46395 P46395]
+
** [http://www.uniprot.org/uniprot/P35172 P35172]
−
** [http://www.uniprot.org/uniprot/P53656 P53656]
+
** [http://www.uniprot.org/uniprot/P62601 P62601]
−
** [http://www.uniprot.org/uniprot/P22805 P22805]
+
** [http://www.uniprot.org/uniprot/P32356 P32356]
−
** [http://www.uniprot.org/uniprot/P45488 P45488]
+
** [http://www.uniprot.org/uniprot/P48016 P48016]
−
** [http://www.uniprot.org/uniprot/P12995 P12995]
+
** [http://www.uniprot.org/uniprot/P78922 P78922]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=7,8-diaminopelargonic acid synthase}}
+
{{#set: common-name=trehalase}}
−
{{#set: ec-number=ec-2.6.1.62}}
+
{{#set: ec-number=ec-3.2.1.28}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction TREHALA-RXN

  • direction:
    • left-to-right
  • common-name:
    • trehalase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1182, trehalose degradation II (cytosolic):
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-1466, trehalose degradation VI (periplasmic):
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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