Difference between revisions of "TRIMETHYLLYSINE-DIOXYGENASE-RXN"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ORN-AMINOPENTANOATE-CAT-PWY ORN-AMINOPENTANOATE-CAT-PWY] == * taxonomic-range: ** [http://metacyc.org...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GABATRANSAM-RXN GABATRANSAM-RXN] == * direction: ** reversible * common-name: ** 4-aminobutyrate tr...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GABATRANSAM-RXN GABATRANSAM-RXN] == |
− | * | + | * direction: |
− | + | ** reversible | |
− | ** | ||
* common-name: | * common-name: | ||
− | ** | + | ** 4-aminobutyrate transaminase |
− | == Reaction(s) | + | * ec-number: |
− | * [[ | + | ** [http://enzyme.expasy.org/EC/2.6.1.19 ec-2.6.1.19] |
− | == | + | == Reaction formula == |
− | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-AMINO-BUTYRATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[SUCC-S-ALD]][c] | |
− | {{#set: | + | == Gene(s) associated with this reaction == |
− | {{#set: common-name= | + | * Gene: [[SJ07892]] |
− | {{#set: nb | + | ** Category: [[annotation]] |
− | {{#set: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | {{#set: | + | == Pathway(s) == |
+ | * [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6536]], 4-aminobutanoate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6536 PWY-6536] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6535]], 4-aminobutanoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6535 PWY-6535] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY] | ||
+ | ** '''2''' reactions found over '''17''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23355 23355] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01648 R01648] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P22256 P22256] | ||
+ | ** [http://www.uniprot.org/uniprot/P50457 P50457] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UZ71 Q9UZ71] | ||
+ | ** [http://www.uniprot.org/uniprot/P50554 P50554] | ||
+ | ** [http://www.uniprot.org/uniprot/P80404 P80404] | ||
+ | ** [http://www.uniprot.org/uniprot/P14010 P14010] | ||
+ | ** [http://www.uniprot.org/uniprot/P17649 P17649] | ||
+ | ** [http://www.uniprot.org/uniprot/P40829 P40829] | ||
+ | ** [http://www.uniprot.org/uniprot/O13837 O13837] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=4-aminobutyrate transaminase}} | ||
+ | {{#set: ec-number=ec-2.6.1.19}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=7}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 09:33, 27 August 2019
Contents
Reaction GABATRANSAM-RXN
- direction:
- reversible
- common-name:
- 4-aminobutyrate transaminase
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 4-AMINO-BUTYRATE[c] <=> 1 GLT[c] + 1 SUCC-S-ALD[c]
Gene(s) associated with this reaction
- Gene: SJ07892
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- GLUDEG-I-PWY, GABA shunt: GLUDEG-I-PWY
- 4 reactions found over 4 reactions in the full pathway
- PWY-6536, 4-aminobutanoate degradation III: PWY-6536
- 2 reactions found over 2 reactions in the full pathway
- PWY-6537, 4-aminobutanoate degradation II: PWY-6537
- 2 reactions found over 2 reactions in the full pathway
- PWY-5022, 4-aminobutanoate degradation V: PWY-5022
- 3 reactions found over 7 reactions in the full pathway
- PWY-6535, 4-aminobutanoate degradation I: PWY-6535
- 2 reactions found over 2 reactions in the full pathway
- PWY-4321, L-glutamate degradation IV: PWY-4321
- 3 reactions found over 5 reactions in the full pathway
- P181-PWY, nicotine degradation I (pyridine pathway): P181-PWY
- 2 reactions found over 17 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: