Difference between revisions of "TRIOKINASE-RXN"
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(Created page with "Category:reaction == Reaction RXN-16380 == * direction: ** left-to-right * common-name: ** long-chain fatty acid-coa ligase * ec-number: ** [http://enzyme.expasy.org/EC/6....") |
(Created page with "Category:reaction == Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** gdp-mannose 6-dehydrogenase * ec-number: ** [http://enzyme...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** gdp-mannose 6-dehydrogenase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.1.1.132 ec-1.1.1.132] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[GDP-MANNOSE]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1828]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | + | * Gene: [[SJ11033]] | |
| − | * Gene: [[ | ||
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ03911]] |
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ11024]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
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== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6073]], alginate biosynthesis I (algal): |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| + | * [[PWY-6082]], alginate biosynthesis II (bacterial): | ||
| + | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | |||
| − | |||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21731 21731] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00880 R00880] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P11759 P11759] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=gdp-mannose 6-dehydrogenase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-1.1.1.132}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:27, 15 January 2021
Contents
Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN
- direction:
- left-to-right
- common-name:
- gdp-mannose 6-dehydrogenase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ11033
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ03911
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ11024
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6073, alginate biosynthesis I (algal):
- 3 reactions found over 3 reactions in the full pathway
- PWY-6082, alginate biosynthesis II (bacterial):
- 3 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
