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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction RXN1F-10 == | + | == Reaction RXN-22199 == |
| | * direction: | | * direction: |
| | ** left-to-right | | ** left-to-right |
| − | * common-name:
| |
| − | ** protochlorophyllide oxidoreductase
| |
| − | * ec-number:
| |
| − | ** [http://enzyme.expasy.org/EC/1.3.1.33 ec-1.3.1.33]
| |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[Light]][c] '''+''' 1 [[MONO-VINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c] | + | * 1.0 [[CPD-4101]][c] '''=>''' 1.0 [[CPD-24186]][c] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | * Gene: [[SJ12355]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ09091]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| | == Pathway(s) == | | == Pathway(s) == |
| | + | * [[PWY-8238]]: |
| | + | ** '''6''' reactions found over '''n.a''' reactions in the full pathway |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | + | * category: [[manual]]; source: [[reaction_creator_sjap]]; tool: [[curation]]; comment: gallo2020 |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| | == External links == | | == External links == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11132 11132]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03845 R03845]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/Q3J1A0 Q3J1A0]
| |
| − | ** [http://www.uniprot.org/uniprot/Q02432 Q02432]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9RFD4 Q9RFD4]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9Z5D9 Q9Z5D9]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9RFD6 Q9RFD6]
| |
| − | ** [http://www.uniprot.org/uniprot/O66148 O66148]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9ZGE9 Q9ZGE9]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9ZGF0 Q9ZGF0]
| |
| − | ** [http://www.uniprot.org/uniprot/P21218 P21218]
| |
| − | ** [http://www.uniprot.org/uniprot/P41646 P41646]
| |
| − | ** [http://www.uniprot.org/uniprot/P56303 P56303]
| |
| − | ** [http://www.uniprot.org/uniprot/P56302 P56302]
| |
| − | ** [http://www.uniprot.org/uniprot/P48100 P48100]
| |
| − | ** [http://www.uniprot.org/uniprot/P48110 P48110]
| |
| − | ** [http://www.uniprot.org/uniprot/P48099 P48099]
| |
| − | ** [http://www.uniprot.org/uniprot/O48741 O48741]
| |
| − | ** [http://www.uniprot.org/uniprot/P73480 P73480]
| |
| − | ** [http://www.uniprot.org/uniprot/Q55607 Q55607]
| |
| − | ** [http://www.uniprot.org/uniprot/P51278 P51278]
| |
| − | ** [http://www.uniprot.org/uniprot/P51188 P51188]
| |
| − | ** [http://www.uniprot.org/uniprot/P51187 P51187]
| |
| − | ** [http://www.uniprot.org/uniprot/Q39617 Q39617]
| |
| − | ** [http://www.uniprot.org/uniprot/P56291 P56291]
| |
| − | ** [http://www.uniprot.org/uniprot/Q7M189 Q7M189]
| |
| − | ** [http://www.uniprot.org/uniprot/P36208 P36208]
| |
| − | ** [http://www.uniprot.org/uniprot/P36437 P36437]
| |
| − | ** [http://www.uniprot.org/uniprot/Q41578 Q41578]
| |
| − | ** [http://www.uniprot.org/uniprot/Q04607 Q04607]
| |
| − | ** [http://www.uniprot.org/uniprot/Q02431 Q02431]
| |
| − | ** [http://www.uniprot.org/uniprot/O22597 O22597]
| |
| − | ** [http://www.uniprot.org/uniprot/Q00864 Q00864]
| |
| − | ** [http://www.uniprot.org/uniprot/P29683 P29683]
| |
| − | ** [http://www.uniprot.org/uniprot/P26177 P26177]
| |
| − | ** [http://www.uniprot.org/uniprot/P26180 P26180]
| |
| − | ** [http://www.uniprot.org/uniprot/P17652 P17652]
| |
| − | ** [http://www.uniprot.org/uniprot/P15904 P15904]
| |
| − | ** [http://www.uniprot.org/uniprot/P13653 P13653]
| |
| − | ** [http://www.uniprot.org/uniprot/P26156 P26156]
| |
| − | ** [http://www.uniprot.org/uniprot/P28372 P28372]
| |
| − | ** [http://www.uniprot.org/uniprot/Q41249 Q41249]
| |
| − | ** [http://www.uniprot.org/uniprot/P26179 P26179]
| |
| − | ** [http://www.uniprot.org/uniprot/P26163 P26163]
| |
| − | ** [http://www.uniprot.org/uniprot/P26178 P26178]
| |
| − | ** [http://www.uniprot.org/uniprot/P26164 P26164]
| |
| − | ** [http://www.uniprot.org/uniprot/P26237 P26237]
| |
| − | ** [http://www.uniprot.org/uniprot/P26238 P26238]
| |
| − | </div>
| |
| | {{#set: direction=left-to-right}} | | {{#set: direction=left-to-right}} |
| − | {{#set: common-name=protochlorophyllide oxidoreductase}}
| + | {{#set: nb gene associated=0}} |
| − | {{#set: ec-number=ec-1.3.1.33}}
| + | {{#set: nb pathway associated=1}} |
| − | {{#set: nb gene associated=2}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: nb pathway associated=0}} | + | {{#set: reconstruction tool=curation}} |
| − | {{#set: reconstruction category=annotation|orthology}} | + | {{#set: reconstruction comment=gallo2020}} |
| − | {{#set: reconstruction tool=pathwaytools|pantograph}} | + | {{#set: reconstruction source=reaction_creator_sjap}} |
| − | {{#set: reconstruction comment=n.a}} | |
| − | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | |
