Difference between revisions of "TRNA-Containing-N2-Dimethylgua-26-Gua27"
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(Created page with "Category:gene == Gene SJ09402 == * transcription-direction: ** positive * right-end-position: ** 233332 * left-end-position: ** 228598 * centisome-position: ** 54.75624...") |
(Created page with "Category:gene == Gene SJ10794 == * transcription-direction: ** positive * right-end-position: ** 314960 * left-end-position: ** 295807 * centisome-position: ** 77.13089...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10794 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 314960 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 295807 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 77.13089 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[HOMOCYSMET-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | + | * [[RXN-12730]] | |
| − | *** source: [[ | ||
| − | |||
| − | |||
| − | *** source: [[ | ||
| − | * [[RXN- | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5041]] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY | + | * [[HSERMETANA-PWY]] |
| − | ** ''' | + | ** '''3''' reactions found over '''2''' reactions in the full pathway |
| − | * [[PWY | + | * [[HOMOSER-METSYN-PWY]] |
| − | ** ''' | + | ** '''4''' reactions found over '''7''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6151]] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-702]] |
| − | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6936]] |
| − | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=314960}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=295807}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=77.13089 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
{{#set: nb pathway associated=6}} | {{#set: nb pathway associated=6}} | ||
Revision as of 09:28, 27 August 2019
Contents
Gene SJ10794
- transcription-direction:
- positive
- right-end-position:
- 314960
- left-end-position:
- 295807
- centisome-position:
- 77.13089
Organism(s) associated with this gene
Reaction(s) associated
- HOMOCYSMET-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-12730
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5041
- 3 reactions found over 4 reactions in the full pathway
- HSERMETANA-PWY
- 3 reactions found over 2 reactions in the full pathway
- HOMOSER-METSYN-PWY
- 4 reactions found over 7 reactions in the full pathway
- PWY-6151
- 3 reactions found over 4 reactions in the full pathway
- PWY-702
- 5 reactions found over 6 reactions in the full pathway
- PWY-6936
- 5 reactions found over 5 reactions in the full pathway
