Difference between revisions of "TRNA-Introns"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9661 RXN-9661] == * direction: ** left-to-right * common-name: ** trans dodec-2-enoyl-[acp] red...")
(Created page with "Category:metabolite == Metabolite CPD-4162 == * common-name: ** stigmasterol * smiles: ** ccc(c(c)c)c=cc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34)))) * inchi-...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9661 RXN-9661] ==
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== Metabolite CPD-4162 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** trans dodec-2-enoyl-[acp] reductase
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** stigmasterol
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** dodecanoyl-[acyl-carrier-protein] reductase
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* smiles:
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* ec-number:
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** ccc(c(c)c)c=cc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34))))
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** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
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* inchi-key:
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== Reaction formula ==
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** hcxvjbmsmiarin-phzdydngsa-n
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* 1 [[Dodec-2-enoyl-ACPs]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Dodecanoyl-ACPs]][c] '''+''' 1 [[NAD]][c]
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* molecular-weight:
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== Gene(s) associated with this reaction  ==
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** 412.698
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* Gene: [[SJ00320]]
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== Reaction(s) known to consume the compound ==
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** Category: [[annotation]]
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* [[RXN-12126]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) known to produce the compound ==
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* Gene: [[SJ03883]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=stigmasterol}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: inchi-key=inchikey=hcxvjbmsmiarin-phzdydngsa-n}}
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** Category: [[orthology]]
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{{#set: molecular-weight=412.698}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
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** '''31''' reactions found over '''31''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=dodecanoyl-[acyl-carrier-protein] reductase|trans dodec-2-enoyl-[acp] reductase}}
 
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{{#set: ec-number=ec-1.3.1.9}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 20:35, 18 December 2020

Metabolite CPD-4162

  • common-name:
    • stigmasterol
  • smiles:
    • ccc(c(c)c)c=cc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34))))
  • inchi-key:
    • hcxvjbmsmiarin-phzdydngsa-n
  • molecular-weight:
    • 412.698

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=TRNA-Introns&oldid=47646"