Difference between revisions of "TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] == * direction: ** left-to-right * common-name: ** threonine synthase * ec...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17155 RXN-17155] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17155 RXN-17155] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** threonine synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.3.1 ec-4.2.3.1]
+
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[THR]][c]
+
* 1 [[ACP]][c] '''+''' 1 [[CPD-18550]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[QXC-ACP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11569]]
+
* Gene: [[SJ03480]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12088]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
+
* [[PWY-7735]], echinomycin and triostin A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7735 PWY-7735]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10841 10841]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01466 R01466]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P04990 P04990]
 
−
** [http://www.uniprot.org/uniprot/Q9Y9K2 Q9Y9K2]
 
−
** [http://www.uniprot.org/uniprot/O28953 O28953]
 
−
** [http://www.uniprot.org/uniprot/P66902 P66902]
 
−
** [http://www.uniprot.org/uniprot/O59293 O59293]
 
−
** [http://www.uniprot.org/uniprot/O66864 O66864]
 
−
** [http://www.uniprot.org/uniprot/Q9PPA8 Q9PPA8]
 
−
** [http://www.uniprot.org/uniprot/O58587 O58587]
 
−
** [http://www.uniprot.org/uniprot/Q9V0P1 Q9V0P1]
 
−
** [http://www.uniprot.org/uniprot/Q9V190 Q9V190]
 
−
** [http://www.uniprot.org/uniprot/O26354 O26354]
 
−
** [http://www.uniprot.org/uniprot/O29700 O29700]
 
−
** [http://www.uniprot.org/uniprot/Q9WZ16 Q9WZ16]
 
−
** [http://www.uniprot.org/uniprot/Q9UZV8 Q9UZV8]
 
−
** [http://www.uniprot.org/uniprot/Q9JU91 Q9JU91]
 
−
** [http://www.uniprot.org/uniprot/Q9CDV8 Q9CDV8]
 
−
** [http://www.uniprot.org/uniprot/P44503 P44503]
 
−
** [http://www.uniprot.org/uniprot/Q58860 Q58860]
 
−
** [http://www.uniprot.org/uniprot/O66740 O66740]
 
−
** [http://www.uniprot.org/uniprot/O50114 O50114]
 
−
** [http://www.uniprot.org/uniprot/Q9YBW2 Q9YBW2]
 
−
** [http://www.uniprot.org/uniprot/P23669 P23669]
 
−
** [http://www.uniprot.org/uniprot/P27735 P27735]
 
−
** [http://www.uniprot.org/uniprot/Q00063 Q00063]
 
−
** [http://www.uniprot.org/uniprot/P74193 P74193]
 
−
** [http://www.uniprot.org/uniprot/P73711 P73711]
 
−
** [http://www.uniprot.org/uniprot/P16120 P16120]
 
−
** [http://www.uniprot.org/uniprot/P00934 P00934]
 
−
** [http://www.uniprot.org/uniprot/P29363 P29363]
 
−
** [http://www.uniprot.org/uniprot/Q9S7B5 Q9S7B5]
 
−
** [http://www.uniprot.org/uniprot/P45837 P45837]
 
−
** [http://www.uniprot.org/uniprot/Q42598 Q42598]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=threonine synthase}}
+
{{#set: ec-number=ec-2.3.1}}
−
{{#set: ec-number=ec-4.2.3.1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 09:30, 27 August 2019

Reaction RXN-17155

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7735, echinomycin and triostin A biosynthesis: PWY-7735
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN&oldid=36072"